Sceloporus undulatus (fence lizard): 121929475
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Entry
121929475 CDS
T07740
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sund04812
]
121929475 (PKP1)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121929475 (PKP1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
RIX1
HEAT_2
V-ATPase_H_C
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
121929475
NCBI-ProteinID:
XP_042321011
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All DBs
Position
4:complement(47077567..47137931)
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AA seq
740 aa
AA seq
DB search
MLHSPSPLKTALAYECFQDQANSTLALPSDHKLKTRGTGKQRVQEQVMMTVKRQKQKTSL
SSASNAAGHSNRGSIYDGVADGYSYGTARGSYYAKAHTGNNWGNAMYNGTLKREGAENKR
YSSYSQMDSWGGRNYNKICSPTSPGSDYCFVQNMKSSRSEPDLYCDPPRGTLRRNQSGSR
VSHKASLNRHSLYSNTCNNQGITTTTRTSKRIPVRSSSYTSANKQDVVYAQPVASKQDVV
YGQPPSNSKITHDEMDYGAMTIQKAIQFLCSSDEKYQAMGAYYLQHTCFQDESAKQEVYR
LGGISKLIELLRSPDENVQQASAGALRNLVFRNPTNKLETRRQNGIRECVSLLRRTGNTE
IQKQLTGLLWNLSSTDELKEDLIHDALPVLTDHVIIPFSGWSDGISNRSREIIDPEVFFN
ATGCLRNLSSADVGRQTMRNYPGLIDSVMTYSQNCVAANRPDDKSVENCICILHNLSYRL
DAEVPNKYTQLNHMARSTYTDKSLTGCFNNRGGKMEYDEYDLPLPEEDYKPRGSSWLYHS
DAIRTYLSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIALKEKGLPRIARLLQS
TNSDVVRSGTSLLSNMSRHPVLHKTMAHQVLPDVTRLLALLSPGSSNYGDTMTSACYTLR
NLMIANPQMAKPYLTGSLINNVVGLCRNGTYPKAAEAARLLLSDLWSNRELQSILKQQGY
DKNMMGSLTGSTFRNLSSRF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccctctccactgaaaacagctctggcatatgagtgcttccaggatcag
gccaattctactctagctttgccctcagatcataagctgaaaacaagagggacaggaaaa
caaagggtccaggagcaagtgatgatgacagtgaagcgacagaagcaaaagacctcactt
tcatcagcatcaaatgcagcaggccactccaaccgaggttccatttatgatggtgtagct
gatggttacagttatggaacagcccgtggaagctactatgccaaagcccacacaggaaat
aactggggcaatgcgatgtacaatggaaccctcaaaagagaaggtgcagagaacaagcgc
tacagttcatacagccaaatggatagctggggtggaaggaactacaacaagatctgcagt
cctaccagtcctggcagtgattactgctttgttcagaatatgaagagtagtcggagtgag
ccagatctctactgtgaccctccgcgaggcacactaaggagaaaccagagtggaagccgt
gtgagtcacaaagcaagtctgaatcgtcacagtctctacagcaatacatgcaacaaccag
ggaattactaccactacaaggacaagcaagagaattccagtccgtagttcctcttacact
tctgctaacaagcaagatgtggtctatgctcagccggtagctagcaaacaagatgtggtc
tatggacagcctccttccaattcaaaaattacccatgatgagatggattatggagcaatg
accatccagaaagccattcagttcctgtgttcctcagatgagaaataccaggccatgggt
gcttactacctccagcacacctgctttcaagatgagtctgcaaaacaagaggtctaccgc
cttggtggcatttccaagctcattgaacttctccgtagcccagatgaaaatgtacagcag
gcttcagctggagccctccgaaacttagtcttcagaaatccaacaaacaagttagaaacc
cgacggcagaatggaattcgagagtgtgtgagccttctcaggaggactggaaacacagaa
atacagaagcagctgacaggtttgctctggaacctgtcatccactgatgaactgaaagaa
gatttgatacatgatgctctccctgttctgactgatcatgtgattattcctttttctggt
tggtctgatggcattagtaacagatcaagagaaattattgaccctgaagttttctttaat
gccactggctgtttgaggaacctgagttctgcagatgttggacgccaaaccatgagaaac
taccctggactgattgactctgtaatgacttattcccagaactgtgtggctgccaatcgg
ccagatgataagtctgtggaaaactgtatctgtatcctgcacaatctgtcttaccgcctg
gatgctgaggtgcctaataaatacacacagcttaaccacatggccaggagcacttacaca
gacaaaagcctgacaggctgcttcaataacagaggaggaaaaatggagtatgatgaatat
gatctacctctacctgaagaagactataaacccagagggtccagctggttgtaccactca
gatgccattcgcacatatttgtctctaatggatcagagcaagaaagatgccaccttggag
gcttgtgctggagcactgcaaaatctgactgcaagcagaggactgatgtcaaatgcaatg
agccagctaattgctttaaaggaaaaagggttgcctcgcatagcacggctcctccaatcc
accaattccgatgttgtccgatctggaacatccttgctaagcaatatgtctcgacacccc
gtcctccacaaaactatggctcaccaggtgctcccagatgtgactcgtcttctagccctt
ctgtctcctggttccagcaactatggagacactatgacatctgcttgctacaccctgagg
aacctaatgatagccaacccccagatggccaagccctacttgacaggcagcttgataaat
aatgtagtggggctgtgccgaaatggaacctatcccaaagcagctgaagctgcccgcttg
ctactgtctgacctgtggtcaaacagagaacttcagtctatactaaaacagcaaggttat
gacaagaatatgatgggatccttaacaggaagcacattcaggaacttgtcttccagattc
taa
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