Sceloporus undulatus (fence lizard): 121929536 Help Entry 121929536         CDS       T07740                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism sund  Sceloporus undulatus (fence lizard) Pathway sund04010   MAPK signaling pathway sund04120   Ubiquitin mediated proteolysis sund04140   Autophagy - animal sund04144   Endocytosis sund04620   Toll-like receptor signaling pathway sund04621   NOD-like receptor signaling pathway sund04622   RIG-I-like receptor signaling pathway sund05132   Salmonella infection sund05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:sund00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     121929536 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     121929536 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     121929536 (TRAF6)    04140 Autophagy - animal     121929536 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     121929536 (TRAF6)    04621 NOD-like receptor signaling pathway     121929536 (TRAF6)    04622 RIG-I-like receptor signaling pathway     121929536 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     121929536 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     121929536 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sund04131]     121929536 (TRAF6)    04121 Ubiquitin system [BR:sund04121]     121929536 (TRAF6) Enzymes [BR:sund01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      121929536 (TRAF6) Membrane trafficking [BR:sund04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     121929536 (TRAF6) Ubiquitin system [BR:sund04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     121929536 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 TRAF6_Z2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Med21 SlyX Sina_ZnF TRAF3_RING PspA_IM30 RING_XB3-XBAT31 zf-Nse DUF4455 PUMA_CC DUF16 zf-RING_11 HMMR_N DUF1664 TMF_DNA_bd Spc29 CEP104_ZnF CENP-F_leu_zip DUF7310 UPF0242 TMF_TATA_bd Motif Other DBs NCBI-GeneID:  121929536 NCBI-ProteinID:  XP_042321105 LinkDB All DBs Position 1:complement(298713441..298744223) Genome browser AA seq 548 aa AA seqDB search MSLLHSNTSFESNSQESGCCAAMASACSAVAKEESLNASDSNGTGGTLSDSFTEETQGYD VEFDPPLESKYECPICLMALREAVQTRCGHRFCKACIVKSIRDAGHKCPIDNEMLLENQL FPDNFAKREILSLTVKCPNKGCNQKMELRHLEDHELHCGFASEKCPQCQGIFQKNQLHDH IKLECPRRQVSCPNCALFMPYEEKEVHDGVCLLANVSCEYCNTVLIREQLPNHYDNDCPT APVPCTYSDFGCPEKMQRNELARHWQEFTQVHMRMMAQSLRNVSVSNPASVNFHGGLSFD PSLFSQAMPTSCECSPEVQTFKETIQQLEGRLVRQDHQIRELIAKMETQNSQMGDLKRTI RNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPGFYTGKPGYKLCMRLH IQLPNTPRCANYISLFVHIMQGEYDSHLSWPFQGTIRLSILDQSEGSSRHNHEEVMDTKP ELLAFQRPTTHRNPKGFGYVTFMQLQTLKQRTYIKDDTLLVRCEVLTRLDLTSPRREGFQ PRSTDGTV NT seq 1647 nt NT seq  +upstreamnt  +downstreamnt atgagtttgctacatagcaacactagctttgaatcgaatagtcaagagagtggctgctgt gcagccatggccagtgcttgcagcgctgtagccaaagaagaaagcctcaatgccagtgat agcaatggcactggtggaacactttcggattctttcacagaggaaacacaaggctatgat gtggagtttgatccaccactggagagtaaatatgaatgtcctatctgtttaatggcactg cgggaagcagtgcaaacgcgatgtggacatcgtttctgcaaggcatgcattgtaaaatct ataagagatgctggtcataaatgtccaatagataatgaaatgttactagaaaatcaactt tttcctgacaactttgcaaaacgggaaatcctttcactgacagtgaaatgtcctaataag ggctgtaaccagaagatggaattaaggcatttagaggatcatgagctacactgtggtttt gcatccgaaaagtgtccacagtgccaaggcattttccagaagaatcagctacatgatcac ataaagctagaatgtccacggcggcaagtctcctgcccaaactgtgcattatttatgcct tatgaagaaaaagaggttcatgatggggtgtgccttttggcaaatgtctcctgtgagtac tgtaacacagtgctaatcagagaacagttgcctaatcactatgataatgattgtcctact gctccagtaccatgtacctatagtgattttggatgtccagaaaaaatgcagagaaatgag ttggcacgccattggcaagagttcactcaggttcacatgaggatgatggcccagagtctc cggaatgtcagtgttagtaatccagcttctgtaaatttccacggaggtttatcctttgac ccatccctcttctctcaagcaatgccaacatcatgtgaatgtagccctgaagtccagacc ttcaaggagaccattcagcagctggaaggtcgcttggtgagacaggatcaccaaatccga gaactcattgcaaagatggagacacaaaactctcaaatgggggatctcaaacgtacaatc agaaatctagaggagaaaatcactgaaatggaagcacagcagtgtaatggtattttcata tggaagattgagcatttcagtgtctatctgaaagcccaagaagaagaaagacctgttgtg atacacagcccaggtttctatacagggaaacctggctacaaactttgtatgcgtttgcac atccagctgccaaatactccaaggtgtgccaactatatttccctttttgttcatattatg caaggagaatatgacagtcatctatcctggccgttccaaggtaccatacgcctttctatt ctggatcagtcagaaggatcttcaaggcacaaccatgaagaagtaatggataccaagcct gagctgctagctttccaacgtccaacaactcatcgcaacccaaaaggctttggatatgtg acttttatgcagttgcaaactctaaaacaaaggacatatataaaagacgatacccttttg gtacgctgtgaagtgttaacacgcttagacttaacaagtccccgaagagaaggttttcag cctcgtagcacagatgggacagtgtag

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