Sceloporus undulatus (fence lizard): 121931543
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Entry
121931543 CDS
T07740
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121931543 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121931543 (TDG)
Enzymes [BR:
sund01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
121931543 (TDG)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121931543 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
121931543
NCBI-ProteinID:
XP_042325367
LinkDB
All DBs
Position
5:28275779..28287230
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AA seq
404 aa
AA seq
DB search
MEAEEPGPRYYTPLQPAFYPFSFHQMMTSATDMDMINDQETPQGILEPNVVQEPIQAAVK
GRKRRTKSSEPKKTTVKVPKVTKAAKSKGKQEKITDTFKVKRKVNRFNGVSEAELLTKTL
PDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLSEEQLNHMDDHTLPHK
YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPKIAVFNGKCIYDIFSKEVFG
VKVKKLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKELRDQLKGVTS
NTEIQEVQYTFDLQLAQEEAKKMAVKEEKYDPGYEAAYGGVYGEKTVAESDSCNFPSNGT
AATAEYSSGSYFGEVVNGQWMTQSFTDQIPEFSNSRPQEEASDA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaggaaccgggtcccagatactacactcctcttcagccggcattttatcct
ttttccttccaccaaatgatgacttcagccacagacatggatatgataaacgatcaggaa
actcctcagggaattttggagccaaatgtggttcaggaacctattcaagcagcagttaaa
ggaagaaaaagaagaactaaatcttctgaacccaaaaaaactactgttaaagtccctaaa
gttactaaagctgccaaatcaaaaggcaaacaggagaaaatcacagataccttcaaagtc
aaaaggaaagtcaatcgttttaatggtgtatctgaagctgaattgttgaccaaaactctt
cccgatatactcaccttcaacttagacattgtaattattggtataaacccaggtttaatg
gcggcctataaagggcatcattatccaggacctggaaaccacttctggaagtgtcttttt
ttgtctgggctaagtgaagaacagttgaatcatatggatgaccatactttaccacataaa
tatggaattggatttacaaatatggtggaaaggacaacaccaggtagcaaggatctttcc
agcaaagagtttcgggaaggaggacgaattctggtgcagaaattgcagaagtatcaacct
aaaatagcagtttttaatggaaaatgtatttatgatatttttagtaaagaggtttttgga
gtcaaggttaaaaagttggaatttggtctacagccacataaagtcccagatacagaaaca
ctttgctatgttatgccatcgtctagcgcaagatgtgctcagtttcctcgtgcacaagat
aaagttcactattacataaagctcaaagaattgagggatcaactgaaaggtgttacatca
aacactgaaattcaggaagtgcaatacacatttgacttgcagcttgcacaagaggaggca
aagaagatggctgtcaaagaagaaaaatacgatccaggatatgaagcagcctatggaggt
gtttacggtgaaaaaacagtggcagagagtgattcctgtaacttcccatcaaatggaaca
gcagccactgcagagtatagcagtgggtcttactttggagaagtcgtcaatggacaatgg
atgacacagtctttcactgaccagattccagagttcagcaactctagaccacaagaggaa
gcaagtgatgcttaa
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