Sceloporus undulatus (fence lizard): 121932829
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Entry
121932829 CDS
T07740
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121932829 (SCN4A)
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121932829 (SCN4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Cytadhesin_P30
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
121932829
NCBI-ProteinID:
XP_042327768
LinkDB
All DBs
Position
6:complement(82820809..82892475)
Genome browser
AA seq
1900 aa
AA seq
DB search
MALPPHIPGPDCLRPFTRESLAAIEKRIAEQEEKKLKHHEEIHEEIVPRKPRSDLEQGRN
LPLIYGDPPPELLGVALEDLDPFYNDQKTYILLSKGKAIFRFSATPALYMLDPFHPIRRG
AIQVLIHSLFSMFIMITILTNCVFMAMSDPPPWAKNVEYTFTGIYTFESMIKILARGFCI
DNFTFLRDPWNWLDFSVIVMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLAVFALIGLQLFMGNLRQKCVRWPPFTNDTLQEVAFGLDSDPF
GNTTLYGNSTGYDGDTILSSNETFDWDEYIHNEENFYFLDGALDALLCGNSSDAGKCPEG
YLCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYADQNEQTLLEEQEKEAEFQQMLEQLKKHQEEQQRLLQEQAAN
SSSAESIIVEKKGESDQDGHSDQDGPKDCNGQVVPRLVLERSATVDESDPMEGHEKSDQN
HLQVTGLEKRAQSALSVVSNTLEELEEAHQKCPPWWYKFAHTFLIWNCCPPWIKLKEFLK
LIVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFNNVLTVGNLVFTGIFTAEMVLKLIAL
DPYEYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISSDCELPRWHMHDFFHAFL
IVFRILCGEWIETMWDCMEVAGQTLCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLAA
SDDDGEMNNLQIAIGRITRGIDYVKKHVLLLLHRELKEKTEPPTEDQDDNKKENFVLNHM
NTGQDFKSEFMDGISKKEGQDFKSDYMDGISKKEGQDFRSVYMDGIRRKETFIDELEQMN
FINNPNLTIHVPIASEESDLYDETDTGEETAEETKDIKKPLPDGTESSICSTVDYKPPDP
EEEEEVAEEAVQEEGPEECFTEACVGRCPCLYVDIKTEKGKKWWNLRKTCFKIVEHNWFE
SFIIFMILLSSGALAFEDIYIGQRQTIRIILEYADKVFSYVFVIEMLLKWVAYGFKVYFT
NAWCWLDFLIVDVSLISLTANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALL
GAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGDLFDISEVNNKSDCMNLLN
IGNVTDVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREMEEQPQYEVNLYM
YLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKP
VKPIPRPQNKYQGMIFDFVTQQAFDIVIMILICLNMVTMMVETDDQSETKINILFQINLI
FIVVFTAECFLKMIALRYYFFTIGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIR
LARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKES
GVDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPHLENPGSDVKGDCGNP
GMGICFFCSYIIVSFLIVVNMYIAIILENFNVATEESAEPLCEDDFEMFYETWEKFDPDA
TQFIDYSTLSDFADTLQEPLRIAKPNKIKLITMDLPMVPGDKIHCLDILFALTKEVLGDS
GEMDALKESMEEKFMANNPSKVSYEPITTTLKRKHEEVCAIKIQRAFRRYLLKRSVKQAS
YIYRHSQDEDTLAEGAPEKEGLIANRMNALYGSSDMQIESETSPEAPPPIELEPITSPET
TQDAGESKEKEEEPKKTTEDDPSKTKESKATKRDVKESFV
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggcactcccgccacacatccctggtcctgactgtcttcgcccattcactcgcgagtcc
cttgcagcaatagagaagcggattgctgagcaggaagaaaagaaactgaagcaccatgag
gagatccatgaggaaatagtaccacgcaaaccccgcagtgacctggagcaagggagaaac
cttccactcatttatggggaccctccaccagaactcctcggggtagccctggaagacttg
gacccattctacaatgatcagaaaacatacatccttctcagcaagggaaaggccattttc
cggttcagtgccacccctgcactttatatgttggatccttttcaccctatccggaggggt
gccattcaagtgcttatacattcattattcagcatgtttatcatgataaccatcttaacc
aactgtgtcttcatggctatgagtgacccaccaccatgggccaagaatgtggaatacact
tttactggcatttatacctttgagtctatgatcaagatactcgcccggggattctgcatt
gacaactttacattcctgcgagatccatggaactggttggatttcagtgtcatcgttatg
gcttatcttacagaatttgtagatttgggcaacgtctctgctctacggacgttccgtgtt
ctcagagcacttaaaaccattactgtcattccagggctaaaaactattgtgggtgccttg
atccagtctgtgaagaagctctctgatgtcatgatcctcacagtgttctgcttggctgtc
tttgctctcattgggttgcaacttttcatggggaacctgcggcaaaagtgtgtccggtgg
ccaccgtttaccaatgacacactgcaagaagttgcctttgggctagatagtgatcctttt
ggcaacactactctgtatggcaatagcactggatatgatggcgacaccattctgagtagc
aatgagacctttgactgggatgaatatatccacaatgaagagaatttctatttcctcgat
ggtgcacttgatgctctgctctgtgggaacagctcagatgctggaaaatgtccagagggg
tatctttgcatgaaagctggccggaacccaaactatggctacacaagctatgacactttc
agctgggcctttcttgctctcttccgcctcatgactcaggactattgggagaaccttttc
caactgactctgcgagcagctggaaaaacatatatgattttttttgtcgtgatcatattc
ttgggctccttctatctcattaacctgatcctggctgtggtagcaatggcctatgctgat
cagaatgaacaaacattgctggaggaacaagagaaagaggcggaattccagcagatgttg
gaacagctgaagaagcatcaggaagaacaacaaaggctgcttcaggagcaggcagcaaac
agcagctctgcagagagtattatagtggagaagaagggagagtcagatcaagatgggcac
agtgatcaagatgggccaaaagactgcaatgggcaggtcgtcccacgcttggtgctggag
cggtcagccacagtggatgagtcagatccaatggagggacatgagaagtctgatcagaac
cacctacaggtgacaggtctggagaagcgagcccagagtgccctcagtgtagtctccaat
accctggaagaactggaagaagcacatcaaaagtgtccaccatggtggtacaagtttgct
cacaccttccttatatggaactgttgtccaccgtggataaagctgaaagagtttctgaag
ctcattgtcatggacccctttgttgatttggggatcaccatctgcattgttctcaacaca
gttttcatggccatggaacactacccaatgactgaagaattcaacaatgtattgactgtg
ggcaatctggtcttcacagggatattcacagctgagatggtgctaaaattgattgctctt
gacccttatgaatacttccaggtgggatggaatatctttgacagcatcattgtcaccctc
agcttggttgagcttggccttgccaatgtccagggtttgtctgttctacgttctttccgt
ctgatgagggttttcaagcttgccaaatcctggccaactctcaacatgctgatcaagatc
ataggcaactcagtgggtgccctgggcaaccttactctggtgctggccatcatcgttttc
atctttgctgtagtgggcatgcagctatttggaaaaagctacatggagtgtgtctgcaag
atttcctccgattgtgagctgccgcgctggcacatgcatgacttcttccacgccttcctt
attgtcttccgcatcctctgtggggaatggattgagaccatgtgggactgcatggaagtg
gctggacagactttgtgcctcattgtcttcatgatggtcatggtcattgggaacttagtg
gtcctgaaccttttcttggctttgctgctgagctccttcagcgctgatagtctggcagca
tccgatgatgatggcgagatgaacaatttgcagattgctattggcagaatcacacgaggg
attgactatgtaaagaagcatgtccttctgctgcttcacagggaactgaaagagaagaca
gagccaccaactgaagaccaggatgacaacaagaaggaaaattttgttctcaaccatatg
aacacaggccaggacttcaaatcagaattcatggatggcatatccaaaaaagaaggccag
gatttcaagtcagactatatggatggcatatccaaaaaagaaggccaggacttcagatca
gtatatatggatgggatacgcagaaaagagacattcattgatgaactggaacaaatgaac
ttcattaacaatcctaatttgaccatacatgtcccaatagcctccgaggaatctgatctt
tatgatgaaactgacaccggtgaagagactgcagaagaaaccaaagacatcaagaagccg
ctaccagatggaactgaatcttccatatgcagcactgttgattacaagcccccagatcct
gaggaggaggaggaggtggctgaggaggctgtgcaggaagaagggccagaggaatgcttc
actgaagcctgcgttgggagatgtccttgtctgtatgttgatatcaaaacagaaaaagga
aagaagtggtggaatcttcggaagacatgcttcaagattgtggagcacaactggtttgag
agtttcatcatcttcatgatcctcctcagcagtggagccctggcttttgaagacatttac
atagggcaacgacagacaatccgcatcatcttggaatatgctgacaaagtcttttcgtat
gtttttgttattgaaatgctgctgaaatgggtggcctatggattcaaggtctacttcacc
aatgcctggtgctggcttgatttccttattgttgatgtctccctcattagtctgacagca
aactggttaggctattcagaactgggacccatcaaatctctaaggacactccgagcactg
agacctcttcgggccctgtccagatttgaaggcatgcgggtggttgtaaatgcccttcta
ggggccattccatccattatgaatgtcctcttggtctgcctgatcttctggctcatcttc
agcatcatgggggtcaacctctttgcagggaaatattaccgttgtgtcaatactaccacg
ggtgacctctttgatatcagtgaagtgaacaacaagagtgactgcatgaacctccttaac
ataggaaatgtcacagatgtccgttgggtcaacgtcaaggtcaattttgacaacgtgggc
ctaggctatctctcacttttgcaagtggccaccttcaagggctggatggacatcatgtat
gcagctgttgactcccgtgagatggaggaacaacctcagtatgaagtgaatctctacatg
tatctctattttgtcatctttatcatctttggggctttcttcactcttaatctttttatt
ggtgtcatcatcgacaatttcaaccagcagaagaaaaagtttggaggaaaggacatcttc
atgacagaagagcaaaagaaatactacaatgctatgaagaaactgggttcaaaaaagccg
gtgaaacccattccaagaccccagaacaaatatcaagggatgatctttgactttgtgacc
cagcaagcttttgatatagtcatcatgatcctcatttgtcttaacatggtgacgatgatg
gtggaaacagatgaccaaagtgaaaccaaaataaacatcctcttccaaatcaacctgatc
ttcattgtcgtcttcacagctgagtgcttcctcaagatgattgccctgcggtactacttc
ttcactattggctggaacatctttgactttgttgtagtcattctttccattgtaggactt
gttctctcagacatcattgagaagtactttgtgtcacctaccctcttcagggtaatccgt
ctggctagaattgggcgtgttctccggctgatccgaggagcaaaaggcatccggacgctt
ctctttgccttgatgatgtccctgccagcacttttcaacattggccttctgctcttcctg
gtcatgttcatttattccatttttgggatgtcaaactttgcttatgtcaagaaggaatct
ggcgttgatgacatctttaattttgagacttttggcaatagcatcatctgccttttccag
atcaccacatcagctggttgggatggcttattgaatcccatcctgaatagtggtccccca
gactgtgatcctcatctggagaaccctggcagtgacgtgaagggagactgtggcaatcct
ggcatggggatctgctttttctgcagctacatcattgtttccttcttgattgtggtcaac
atgtacattgctatcatcctggagaacttcaatgtagccacagaggagagtgctgagcct
ctgtgtgaagatgactttgaaatgttctatgagacatgggagaagtttgaccctgatgcc
acacagttcattgattatagcacactctctgactttgcagacactttgcaagaacctctg
cgaattgctaaaccgaacaagatcaagttgatcacaatggacttacccatggttcctggg
gataagatacattgtttggatatcctctttgcacttaccaaagaagtgctgggggactct
ggtgaaatggatgctctgaaggaatcaatggaggagaaattcatggctaacaatccctca
aaggtgtcttatgaaccaattaccaccacgctgaaaaggaagcatgaggaagtgtgtgcc
atcaaaatccaacgggcattccgacgatatctactaaagcggtcagtgaagcaggcctct
tacatatacagacatagtcaagatgaagataccttggcagaaggggccccagagaaagaa
ggattgattgcaaatcgaatgaatgcactctatggatcttcagacatgcaaatagaaagt
gaaacatctccagaagcacctccacctattgaacttgagcctatcaccagtccagagact
acacaagatgctggtgaatccaaagagaaagaagaggaacctaaaaaaacaacagaagat
gatcccagcaaaactaaagaatcaaaggccaccaaacgtgatgtaaaagagtcatttgta
taa
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