Sceloporus undulatus (fence lizard): 121934862
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Entry
121934862 CDS
T07740
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03440
Homologous recombination
sund03460
Fanconi anemia pathway
sund04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121934862 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
121934862 (BRCA1)
03460 Fanconi anemia pathway
121934862 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121934862 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121934862 (BRCA1)
03036 Chromosome and associated proteins [BR:
sund03036
]
121934862 (BRCA1)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121934862 (BRCA1)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121934862 (BRCA1)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121934862 (BRCA1)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121934862 (BRCA1)
Multi subunit type E3
BRCC complex
121934862 (BRCA1)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121934862 (BRCA1)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121934862 (BRCA1)
BRCA1-A complex
121934862 (BRCA1)
BRCA1-B complex
121934862 (BRCA1)
BRCA1-C complex
121934862 (BRCA1)
BRCA complex
121934862 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
121934862 (BRCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
BRCT_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-Nse
zf-RING_6
RING_XB3-XBAT31
U-box
zf-ANAPC11
RTT107_BRCT_5
DUF2968
Motif
Other DBs
NCBI-GeneID:
121934862
NCBI-ProteinID:
XP_042331696
LinkDB
All DBs
Position
6:complement(82198576..82257696)
Genome browser
AA seq
1725 aa
AA seq
DB search
MDSSVPTIAEVHGMLLALQKNLECPICLEVMKEPVSTNCAHIFCRFCTLKLLRQKKGVTQ
CPLCNAKVTKRSLREDVRFKQVIKVVLEVIHAFERDTGLKFSDDRCFPKRDTETTSTADP
WKEQPVVDCKGYRDRLKREKEEKKGNFTLGESSNLPVCSGTNKRYSLRRKSSSSKAVVLE
VGSDSSEDAYKKTAAVKCVDFRKKSLSHDDEIYAENQSPCQVDLPRPSAEDEALNILGAC
GFLEERLGSIECTPARTENVEVVAENVAAQKSQGLSFSDPAMRQHDTKPEAGSRQQDGLC
SSLRKSKAIGEARDPTTNEQAGDGTEWAGVVLPAGHTPTLCEDEEHLLQSQTPANSPLNQ
VTGKRLMRSIRKVNEWLSKSNEVLSPSSMQDIQTEEVDQDLNSCVMDSDFCVSQKTGQIE
DQGKFTTWHESDWPLAKPVTSRIEDKIFGRTYSRERKSTSLQNERDTIHIQAEECIAVNT
KSRETPRKTTLTRKRKATSELTPDDFIRRQDVKECRKRPVMDDGAPLEECEQTFALVDDK
PVEHQRDAKLPEEPSIKEAVSNLEGIESGQALNICHKLPESSLKNSKKRPNSLSRRSRQS
MRPLGQLQFVVDGNSRSPEQSKIETEDEEAKEADTGQKQIRRSRRLQLLTEGASSGTTES
QLQPEGAWKQSEPAKREKENANEREKKQRWSQAGNMPPHSVTENDPSASQKVLSWLDTSQ
MNMELDASKVCANPSTSPCATGVVKSLNVEETKEGHSPCFIVPTASSQDSCSLLQFPPTK
VKQITSDEGKKLIADQPEKSILCSQMQEGNDSCTGVATESCNHADDKAAETMELNPETDD
SELDADFVQNIFSCCKRQSFLLHPGPVKESAPEIQRELKAGTVEDSRVEYLEKLTLYEER
RDAVACVADKGITVQRLATSVSGFPELENKTEHLQLALQAPLPDHLPMPVQSGARNGEGG
NQLQSQKPTTEKSASPEMEENTNPSGNNRRLSGNGRNPSVSRNGNLQSCSLSLVNETRSS
IGHFQEEESAGAENKGLTLSAQPESMQACPVVCQPPLPQFSHVGKKWMEQKQLNSDIEES
TDISSIGVPKCLIPRERMEQYTEEASHAFELSSETPEGLLDPAIQSKEDPPSPLETERED
ISIVPTKMDKQSLVGKDLDINDRSSSMLKRKRFVLAHRRPVRKLPSSEEDDSSEEEQLPC
FQALLFDKSSHLLGEKETSAEMLALKSGSRSNLKPQDDDVSPSQESECSVNLFSSQSHAS
GDSCSKACDTKHLTPVCSSIEKLASLCENKKHTQASSDTPREAVQPKDGQPRCVNSESNL
GEECMGYDSEASHLGDSSGLSSQGEILTTQQSEERFQARHMKQQRYAMQNDLKKLQQEMV
IIEAALKQGSQHDAPEELLQLDKEDDFTGEQKRSLKESTVKVTSEDKQNVLGDSFSIVKS
THGTLGSHSIPSSKHEEDISSKTTKASPGATPGTFRRPLTPRHEAQRRLISPLTPTAHNC
SEKENSKGPFLSSKRNMSLVASGLNQGELRLVQRFARKTESTWSNKIVEETTHVVMKTDE
DRVCERTLKYFLGIAAQKWVVSYQWIEHSLKAGRVLNEEDFEVKGDVINGRSHQGPKRAR
ESPAGTLFKGLEICCYGPFTDMLPEQLEWMVELCGASLVKQPHLFAHATNSSAVVIVQPD
AWIEDAACQGLPPQCSATVVLREWVLDSIACYQRQPFDEYIVQPM
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctgttccaaccatcgctgaagtccatgggatgctgctggctttgcagaag
aacctggagtgccccatttgcctggaggtgatgaaggagccagtctcaacaaactgtgcc
catatcttttgcaggttctgcactttgaaactccttagacagaagaaaggtgtaacacag
tgtccactttgcaatgccaaggtcaccaaaagaagtctaagggaagatgtccgatttaag
caagtaatcaaagtggtgctggaagtcatacatgcttttgagcgtgatacagggctcaag
ttttcagatgatcggtgtttccccaagagagacacagaaaccacttctactgcagatcca
tggaaggaacagccagttgttgactgtaaaggatacagggacaggctgaaaagagagaag
gaagaaaaaaaggggaattttaccttgggtgagagctctaacttgccagtatgcagtgga
actaacaaaagatattccctgagaagaaaaagcagttccagtaaagctgttgtccttgaa
gttggatcagactcatctgaagatgcctataagaagacagctgcagtcaaatgtgtggat
ttcagaaaaaaatctctgtctcatgatgatgaaatatatgctgagaatcaaagcccttgt
caggtggaccttcctaggccaagtgctgaagatgaggcattaaacattttaggtgcatgc
ggtttcttggaagaaagactgggaagcatagaatgcactccagccaggactgaaaatgta
gaagttgttgcagagaatgttgctgcgcagaagagccagggtttgtctttttcagatcct
gccatgagacagcatgatacaaaacctgaagccggttccagacagcaggatggactttgc
tcttcactcaggaagagcaaggcaattggggaagccagagatcccactacaaatgagcag
gcaggtgatggtacagaatgggctggtgttgtgctgcctgctggacacacaccaacactc
tgtgaagatgaggagcacctgctacaatcccagactccagctaacagtcctttgaatcag
gtcactgggaagagactgatgcggagtatccggaaggtcaatgaatggctttcaaaaagc
aatgaggtcctttctcctagctccatgcaggacattcagactgaagaggtggatcaggat
ctgaactcttgtgtgatggattcagacttctgtgtctctcaaaagactggacagattgaa
gaccagggaaagtttacaacgtggcatgaaagtgactggccattagccaaaccagttacc
tctaggattgaagataaaatatttgggagaacttacagcagggaacgcaagtcaacctca
cttcagaatgaaagagacacaatccatatacaagcagaggaatgcattgctgtcaacaca
aaatcccgtgagacacctagaaaaacaaccttaacacgaaagaggaaggccacatcagag
ctgacacctgatgatttcatcagaagacaggatgtgaaagaatgtcggaagagacctgtc
atggatgatggtgctcctttggaagaatgtgagcaaacctttgctcttgttgatgacaag
cctgttgaacaccaaagagatgctaagttgcctgaagaaccttctatcaaggaagcagtg
tccaatttggaaggaattgaaagtggacaagctctgaacatctgccataagttgccagag
tcaagcctgaaaaattcgaagaagagaccaaactcattgagtaggagaagtagacaatca
atgaggccacttggtcagttgcaatttgtggtagatggaaactccaggtctcctgaacag
tcaaaaatagagacagaggatgaggaggcaaaagaagcagacacaggccagaaacagatc
aggcggagtaggaggcttcaattactcacagaaggagcctcgagtgggaccacggaatct
cagctgcaaccagaaggagcttggaagcaaagtgagccagcaaagcgagaaaaggaaaat
gcgaatgaaagagaaaagaaacaaaggtggtctcaagcaggaaatatgccacctcactct
gtaacagaaaatgaccccagtgcatcgcagaaagttttgtcatggttagacaccagccag
atgaacatggaacttgatgcaagtaaggtttgtgctaacccttcaacatctccttgtgcg
acaggagttgtaaaaagtctgaatgttgaagaaactaaagagggccatagtccttgtttc
attgttcccacagcaagctcccaagacagctgttcactcctgcagttcccgcctacaaaa
gtgaagcaaatcacttctgacgagggcaagaagctcatagcagatcaacctgagaagagt
atattatgtagtcagatgcaagagggcaatgattcttgcacaggggttgccacagaaagc
tgcaatcatgctgatgataaagctgcagagaccatggagttgaacccagaaactgatgac
agcgaactagatgcagactttgtacagaacatattcagctgttgcaaacgccagtcattc
ttacttcatccaggtccagtgaaggagtctgctcctgaaattcaaagggaactcaaagct
ggcacagtagaagatagcagggttgaatatttggagaaattgactctatatgaggaaaga
agagacgctgttgcctgtgtggcagacaaaggcatcactgtccaaagactggcaacctct
gtctccggtttcccagagcttgagaataaaactgagcacctccagcttgctttgcaggct
cccttgccagatcatctacccatgccagtgcagtcaggtgccagaaatggagagggcgga
aatcagcttcaaagtcaaaaacccacaactgaaaaaagtgcatctccagaaatggaagaa
aacacaaatcccagtggcaataatagacgtttgagtggaaatggtagaaatccaagtgtt
tcgagaaatggcaacctccaaagctgcagtttaagcctggttaatgagacacgttccagc
ataggccactttcaagaagaagaatccgcaggtgctgaaaacaaagggctgacattaagc
gctcaaccagaatcaatgcaggcatgtcctgtagtttgtcagccaccacttcctcaattc
agccatgttgggaaaaaatggatggaacaaaagcaattgaacagtgacatagaggaatca
actgatatttccagtataggtgttcctaagtgcctgattcccagagagaggatggaacaa
tacactgaggaggcgtcccatgcctttgaactctcatcggagacaccggaaggcttgctg
gacccagctatccaaagcaaagaagacccacctagtcctttggaaacagagagggaagac
atctcaattgtacctactaaaatggacaagcaatctcttgttgggaaagatctggacatc
aatgacagaagcagttccatgttgaagaggaaacgttttgttttggcacaccgaagacca
gtgcggaaactgccatcttcagaagaggatgattccagtgaggaggaacagctgccatgt
tttcaggcactgttatttgacaaatcatcacacttattgggggaaaaagagacatcagca
gagatgctggcactgaagagtggcagcagaagtaacctcaaaccccaggatgatgatgtc
tctccaagccaggagtcagagtgctctgtgaacctgttttcctcccagtcacatgcatct
ggggactcttgcagtaaggcctgtgacacaaagcatttaaccccagtttgtagttctata
gaaaagcttgcaagtctctgtgagaataaaaaacatactcaagccagcagtgacactccc
agagaagctgtgcaaccaaaagatggacaacccagatgtgtgaattcagaatccaattta
ggtgaagaatgcatgggctatgacagtgaagctagccacctgggagattcatcaggccta
tcctcccagggtgagatcctcaccacacagcaatctgaagaaaggtttcaagccagacac
atgaaacagcaaagatatgccatgcaaaatgacttaaagaaactccagcaggagatggtt
atcattgaggcagctctcaaacagggaagccagcatgatgctcctgaagaattgctgcaa
ctagataaggaagatgatttcactggagaacagaagagatcattgaaagaaagcacagtg
aaggtgacttctgaagacaaacaaaatgttctaggtgattctttctccattgtcaaaagc
acacatggaacactaggcagtcattccatcccttcctcaaagcatgaagaggacatttcc
agtaagacaacaaaagcatctcctggtgccacaccaggcacattcagaagaccacttaca
ccaagacatgaggcacagagaaggttaatctctcccctgacacctacagcacacaattgc
tccgaaaaagagaactcaaagggcccattcctgagcagcaagaggaatatgtctctggtg
gcatcaggtctgaaccaaggcgagttgcgactagtgcagcggtttgccaggaaaactgag
agcacttggtcaaataaaattgttgaagaaacaacccatgtagtaatgaaaaccgatgag
gatcgggtttgtgaacgaaccctgaagtacttcttgggtattgctgcacagaaatgggtg
gtaagctaccaatggattgaacattcactcaaagcaggaagagtccttaatgaggaggac
tttgaagtcaaaggagatgtaatcaatggcagaagccatcaaggacccaaaagagcaagg
gaatctcctgctggaacgcttttcaaaggcctcgaaatatgctgttatggaccattcact
gacatgcttccagaacaactggagtggatggtagagctgtgtggcgcctctcttgtgaaa
caacctcatttatttgcccatgcaacaaactcttctgctgtggtgattgttcagcctgat
gcttggatagaagatgctgcctgccaagggctcccaccgcagtgcagtgctactgtagtt
ttacgtgagtgggtgctggacagcattgcttgctaccaacgccagccattcgatgaatat
attgtgcagccaatgtga
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integrated database retrieval system
