Sceloporus undulatus (fence lizard): 121935732
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Entry
121935732 CDS
T07740
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund02010
ABC transporters
sund04146
Peroxisome
sund04977
Vitamin digestion and absorption
sund04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121935732 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121935732 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121935732 (ABCD4)
04980 Cobalamin transport and metabolism
121935732 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121935732 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sund02000
]
121935732 (ABCD4)
Enzymes [BR:
sund01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
121935732 (ABCD4)
Membrane trafficking [BR:
sund04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121935732 (ABCD4)
Transporters [BR:
sund02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
121935732 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_29
DEAD
T2SSE
AAA_7
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
121935732
NCBI-ProteinID:
XP_042333493
LinkDB
All DBs
Position
1:complement(338282166..338309125)
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AA seq
601 aa
AA seq
DB search
MAPGRAAGGRPRPRLDRQFLQRFLKIQTILFPTCSSKNTLMFLTLLGVALLEQLVIYQVG
LIPSQYFGVLGSKDFYGFQKITTLALMLIVLNSMLKSFDQFICNLMYLNWRKTLTEYLHG
YYFQGQVYYTLNILHEEIDNPDQRISQDVERFCKQLSSMARKVIISPFTLVYYTYQCFYS
TGWMGPVSIFGYFFIGTIVNKILMSPIVSKLVIQEKLEGDFRFKHMQLRVNAESAAFYRA
GEVEHMRTNRRLQNLLLTQRELIGKELLLYIGINTFDYLGGILSYVVIAIPIFGGIYNDL
DPAELSSLVSKNAFVSIYLIGCFSQLIDLSTTLSDVAGYTHRIGELQEMLLKLFKKQNDC
ELQAKWNFGIVSKDKMVSSDTAFLLEQVSVSAPSEKLLIKDLNLRVAQGDNLLITGNTGT
GKTSLLRVLGGLWESKLGNIHMLTCFGPHGIVILPQRPFFTDGTLREQVIYPLKEIYPDS
GSADDERIQRFLELTGLSDLLLRTGGLDQPVDWNWYDILSPGEMQRLSFARLFYLQPQYA
VLDEATSALTEAAENELYKICAQLGMTIVSVGHRSSLEKFHSWMLKLCGEGKWELTRIKK
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgggagagcggcgggtggccggccccggccccgactagaccggcaatttctc
caacgttttttaaagatccaaactattttatttcccacatgctcctccaagaatacactg
atgttcctaaccttgttgggagttgcccttttggagcagctggtcatttatcaggtgggg
ctgatccccagtcagtattttggagttctgggaagcaaagacttttatggattccaaaaa
ataaccacacttgctctgatgctcattgtattgaactctatgttaaagagttttgaccaa
tttatttgtaacttgatgtatttgaactggagaaagaccctcactgaatacctccatggc
tactacttccagggccaggtgtattacactttgaatattctgcatgaggaaattgataat
ccagaccaacgaatcagtcaggatgtggagaggttctgcaaacaactcagctctatggcc
aggaaggtgatcatttcacctttcacccttgtttactacacctatcagtgcttttacagc
actggctggatgggtccagtgagcatctttggctattttttcattggaaccattgtcaac
aagatcttgatgagccccattgtttcaaaactggtaattcaggagaaactggaaggtgat
ttcaggtttaagcatatgcagcttcgagttaatgctgaatccgcagctttttacagagct
ggtgaagttgagcacatgagaaccaatcgcaggttacaaaatcttctgctgacacaaagg
gagctgataggcaaagagctactgctgtacattggaatcaacacatttgattatctgggc
ggcatactgagttatgtggtgattgccattcccatatttggtggcatctacaatgatctg
gatccagcagaattgagctccttggttagcaagaatgcctttgtctctatttacctgatt
ggctgctttagtcagctcattgacctctcaaccactttgtctgatgtggctgggtacaca
cacagaattggggaactgcaagaaatgctgctgaaactattcaagaaacaaaatgattgt
gaattgcaagccaaatggaatttcggcattgtttccaaagacaagatggtttccagtgac
acagcttttctcctggagcaagtctctgtctctgcaccttcggagaagctgctcatcaag
gacttaaatctgagagtcgcacaaggagacaatctgctaattactggaaacacaggcaca
gggaagacatctttgctccgtgtccttgggggtctctgggagagcaagctggggaatatc
cacatgctgacttgttttggcccacatggaattgtgatcttgccacagcggcctttcttt
acagatgggaccctgagagaacaggtgatataccccctgaaggaaatctatccagattca
ggttctgctgatgatgaaaggatacagaggttcttggaactgactgggctgtctgatctg
ttgttgagaacaggaggtttggaccagccagtggactggaactggtatgatattctgtct
ccaggtgagatgcagaggctatcatttgcccggctcttctatctccaaccccagtatgca
gtgctagatgaagctaccagtgcattgacagaggctgcagagaatgaactgtacaagatc
tgtgcccagctggggatgactatagtcagtgtgggacatcgcagcagtctggaaaagttt
cacagctggatgttgaaactgtgtggagaaggaaaatgggaattaacgagaatcaagaaa
gattga
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