Stigmatella aurantiaca: STAUR_2788
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Entry
STAUR_2788 CDS
T01425
Symbol
metH
Name
(GenBank) Methionine synthase (B12-dependent)
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur00270
Cysteine and methionine metabolism
sur00450
Selenocompound metabolism
sur00670
One carbon pool by folate
sur01100
Metabolic pathways
sur01110
Biosynthesis of secondary metabolites
sur01230
Biosynthesis of amino acids
sur04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
STAUR_2788 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
STAUR_2788 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
STAUR_2788 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
STAUR_2788 (metH)
Enzymes [BR:
sur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
STAUR_2788 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding
B12-binding_2
CdhD
Motif
Other DBs
NCBI-ProteinID:
ADO70586
UniProt:
Q08RV5
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All DBs
Position
3375498..3379010
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AA seq
1170 aa
AA seq
DB search
MSHLPAPLPPPPGENGRRIEALRAAMRERVLVLDGAMGTLIQAQNLKMADFGGSEYEGCN
EHLVLTRPDVIQGIHAEYFAAGADVTETDSFGGTPLVLAEFGLEHKALEINIQASRLARQ
AAADAEAKDGRMRWVAGSIGPTTKAISVTGGITFDELVNQFAAQTEGLAIGGSDYLLVET
CQDTRNVKAALLGIERAFRKLGYALPVAVSGTIEPMGTMLAGQSVESLAASLEHVELLYL
GLNCATGPEFMTDHLRSLSGMSPFAVSCVPNAGLPDENGNYLESPEMLARSLRRFCEHGW
LNVVGGCCGTRPSHIRAIAEAVKGLRPRSATVRPRSTLSGVDFLEVTDELRPIIVGERTN
VIGSKKFKELIIAEQYEDASEVARAQVKRGAQVIDICLANPDRDELEDMNRFLDVVVKKV
RVPLMIDSTDEKVIERALTYCQGKAIINSVNLEDGEERFEKVVPLARQYGAALVVGCIDE
VGMAVTRQRKLEVAQRSVELLTGKYGMKAEDLYFDPLVFPCASGDAQYTGSAVETIEGVR
LIKQRFPQCKTVLGISNVSFGLPTAGREVLNSVFLYHCVQAGLDMALVNSEKLERYPSLP
QEERTLAEDLLYNRGADPVTPFAAHFRERKPQKAATSSLPLEERLQRYIIEGSRDGLFAD
LDLAMEKYGPLEIINGPLMKGMDEVGRLFGANELIVAEVLQSAESMKAAVGHLEPRMSQT
QTATRGKIVLATVKGDVHDIGKNLVEIILANNGFQVVNLGIKVPPEQLVQAVREHRPDML
GLSGLLVKSAHQMVATAEDLKRAGVEVPILVGGAALSRNFVDKNIAPAYSGTVAYAQDAM
SGLDLAKQIVDPEGHDKLRQELADRRAKLAQEVKDRPKASAPVVPATRSKSVRVLETVPA
VPDYERHVLTNTPLDHIWKFINPVMLYGRHLGLRTSSRVLGTPAEAELSKTEEGRKALAL
KEAVEELKTFLRGGVMHARAVFQFFKAGSDGNRVLLFDGLTGEQKAAFDFPRQEKEDGLC
LADYVLPLEGGKPRDNLGMFVTTAGGGIREISEEFKARGEFLKMHAVQALALETAEGYAE
LLHTQLRSMWGFPDRPEMTMLERFRAEYEGKRYSFGYPACPRLEDQALLFAALRPEEIGV
QLTDGFMMEPEASVSAVVFHHPQAHYFSVT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagccacctgcccgcccccctgccgccaccccctggtgagaatggccgccgcatcgag
gccctgcgcgccgcgatgcgcgagcgggttctggtgctcgatggtgccatgggcacgctc
atccaggctcagaacctcaagatggccgacttcggcgggtccgagtacgagggctgcaac
gagcacctcgtcctcacccggcccgacgtcatccagggcatccacgcggagtacttcgcc
gcgggcgccgatgtgacggagacggactcctttggcggtacgccgctggtgctcgccgag
ttcggcttggagcacaaggcgctggagatcaacatccaggcctcacggctggcccgccag
gcggccgcggacgccgaggccaaggatggccggatgcgctgggtggccggctccatcggg
cccaccaccaaggccatctcggtcacgggcggcatcaccttcgatgagctggtgaaccag
ttcgcggcgcagaccgaggggctcgccatcgggggctcggactacctgctggtggagacg
tgccaggacacccgcaacgtgaaggcggcgctcctgggcatcgagcgggccttccgcaag
ctgggctatgcgctgcccgtggcggtgtccggcaccatcgagcccatggggacgatgctg
gcgggccagtcggtggagagcctcgccgcgtcgctggagcacgtggaactgctctacctg
ggcctcaactgcgccaccggtccggagttcatgacggaccacctgcgctccttgtccggc
atgagccccttcgccgtctcgtgcgtgcccaacgcggggttgccggacgagaacgggaac
tacctggagtcgccggagatgctcgcccgctcgctgcggcgcttctgtgagcacggctgg
ctcaacgtggtggggggctgttgtggcacgcgcccaagccacatccgcgccatcgccgaa
gcggtgaaggggctgaggccccggagcgccacggtccgcccgcgctcgacgctgtccggc
gtggacttcctggaggtgaccgacgagctgcgccccatcatcgtgggcgagcgcaccaac
gtcatcggcagcaagaagttcaaggagctcatcatcgccgagcagtacgaggatgcctcg
gaggtggcccgggcccaggtgaagcggggcgcccaggtcatcgacatctgtctggcgaac
ccggaccgcgacgagctggaggacatgaaccgcttcctggacgtggtcgtcaagaaggtg
cgcgtgcccttgatgatcgactccacggacgagaaggtcatcgagcgggcgctgacctac
tgtcagggcaaggccatcatcaactcggtcaacctggaggatggcgaggagcgcttcgag
aaggtggtgcccttggcgcgccagtacggcgcggcgctggtggtgggctgcatcgacgag
gtgggcatggccgtcacgcgccagcgcaagctggaggtggcccagcgctccgtggagctg
ctcacgggcaagtacggcatgaaggcggaggacctgtacttcgatccgctggtgttcccg
tgcgcttccggtgacgcgcagtacacgggcagcgcggtggagaccatcgagggcgtgcgc
ctcatcaagcaacgcttcccccaatgcaagacggtgctgggcatctccaacgtgtccttc
ggcctgcccaccgcgggccgcgaggtgctcaactccgtgttcctctaccactgtgtccag
gccgggttggacatggccttggtgaactcggagaagctggagcgctacccgtcgctgccc
caggaggagcgcacgctggcggaggacctgctctacaaccggggcgcggacccggtgacg
cccttcgccgcgcacttccgcgagcgcaagccccagaaggcagccaccagctcgctgccg
ctggaagagcggttgcagcgctacatcatcgagggctcgcgggatggtctcttcgccgac
ctggacctggcgatggagaagtacgggcccctggagatcatcaacggacccctgatgaag
ggcatggatgaggtgggccggctcttcggggccaacgagctcatcgtcgcggaggtgctc
cagagcgccgagtccatgaaggccgcggtgggccacctggagccgcggatgagccagacg
cagaccgccacgcgcggcaagatcgtcctcgccacggtgaagggggacgtgcacgacatc
ggcaagaacctggtggagatcatcctcgccaacaatggcttccaggtggtgaacctgggc
atcaaggttccgcccgagcagctcgtgcaggccgtgcgcgagcaccggccggacatgctc
ggcctgtcgggcctgctggtgaagagcgcgcaccagatggtggccaccgcggaggacctc
aagcgcgcgggcgtggaggtgcccatcctcgtgggcggcgccgcgctcagccgcaacttc
gtcgacaagaacatcgcccccgcttactcgggcacggtggcctatgcgcaggacgccatg
agcggcctggacctggccaagcagatcgtcgatccggaagggcatgacaagctccggcag
gaactcgccgatcgccgggcgaagctggcccaggaggtcaaggatcgccccaaggcgagt
gcccccgtggtgccggccacgcgcagcaagtccgtccgggtgctggagacagtcccggcc
gtgccggactacgagcggcacgtgctgacgaacacgccgctggaccacatctggaagttc
atcaacccggtgatgctctatggacgtcacctggggctgcgcacctcctcccgcgtgctg
ggaacaccggccgaggcggagctgagcaagacggaagaggggcgcaaggcgctggcgttg
aaggaggcggtggaggagctcaagaccttcctgcgcggcggggtgatgcacgcgcgcgcc
gtcttccagttcttcaaggcggggagcgacggcaaccgcgtgctgctcttcgacgggctc
accggcgagcagaaggcggccttcgacttcccccgtcaggagaaggaggacgggttgtgt
ctggcggactacgtgctgccgctggaaggcgggaagccgcgagacaacctggggatgttc
gtcaccaccgcgggcgggggcatccgggagatctccgaggaattcaaggcccggggcgag
ttcctcaagatgcacgccgtgcaggcgctggcgctggagacggccgaaggctacgcggag
ctgctccacacccagttgcgcagcatgtggggattcccggaccggcccgaaatgaccatg
ctggagcgcttccgggcggagtatgagggcaagcgctactcgttcggctatccggcgtgc
ccccggctggaggaccaggcgctgctgttcgccgcactgcgtccagaggagatcggcgtg
caactgacagatggattcatgatggagccggaagcctccgtgtccgcggtcgtcttccac
catccgcaggcgcactacttctcggtgacatag
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integrated database retrieval system
