Stigmatella aurantiaca: STAUR_4899
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Entry
STAUR_4899 CDS
T01425
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STAUR_4899 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_4899 (nth)
Enzymes [BR:
sur01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STAUR_4899 (nth)
DNA repair and recombination proteins [BR:
sur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STAUR_4899 (nth)
Prokaryotic type
STAUR_4899 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
LysR_substrate
DUF2400
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
ADO72677
UniProt:
Q08S09
LinkDB
All DBs
Position
6038646..6039287
Genome browser
AA seq
213 aa
AA seq
DB search
MVPAQRIPPLLQQLRQAHPDARYELNWTTPFELLVATLLAAQCTDERVNRVTATLFQKYQ
GPQAFAQADTGALEEDLRPTGFYKQKAKAVQTMSRELLARFGGEVPQSLEQLVTLPGVAR
KTANVVLNTAFQLPSGVIVDTHVARVSQRLGLTQKKKPEDIEQELMRLVPQDQWTFFGPA
MVLHGRYTCTARKPQCGACPMVAFCPKIGVAEE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgcccaacgcatccctccccttctccagcagcttcggcaagcacaccccgat
gcccgctatgagttgaactggacgacgcctttcgagttgctcgtggccaccctcctggcc
gcgcagtgcacggatgagcgcgtcaaccgggtgaccgccacgctcttccagaagtaccag
gggccccaggccttcgcccaggcggacaccggagcgctcgaggaggatctccggcccacg
ggcttctacaaacagaaggcgaaggcggtgcagaccatgagccgggagctgctcgcgcgg
tttgggggcgaggtgccgcagagcctcgagcagctcgtgacgttgcccggcgtggcccgc
aagacggcgaacgtcgtcctcaacaccgccttccagctgccctcgggcgtcatcgtcgac
acccacgtggcccgggtcagccagcggctggggctcacccagaagaagaagcccgaggac
atcgagcaggagctgatgcgcctggttccccaggaccagtggaccttcttcggaccggcc
atggtgctccatggccggtatacctgcacggcgcgcaagccccagtgcggcgcctgcccc
atggtggccttctgcccgaagatcggggtggcggaggagtaa
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