Strix uralensis (Ural owl): 141947647
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Entry
141947647 CDS
T11361
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
sura Strix uralensis (Ural owl)
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sura03036
]
141947647 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
sura03400
]
141947647 (SMCHD1)
Chromosome and associated proteins [BR:
sura03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
141947647 (SMCHD1)
DNA repair and recombination proteins [BR:
sura03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
141947647 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_1st
Ig_SMCHD1_5th
Ig_SMCHD1_8th
Ig_SMCHD1_6th
Ig_SMCHD1_2nd
Ig_SMCHD1_7th
Ig_SMCHD1_4th
SMC_hinge
HATPase_c_3
Big_1
HATPase_c
Motif
Other DBs
NCBI-GeneID:
141947647
NCBI-ProteinID:
XP_074735041
LinkDB
All DBs
Position
1:complement(121162124..121251541)
Genome browser
AA seq
2034 aa
AA seq
DB search
MAAAAGGSRGGRRPVLLTPRGSGDRTVFLFDRRREQADPDEKVLSYGKDNYRGFRSAVCQ
AFGIATDENFVITTTNRKEITEDNFRELVQDGVTLYLLQSVDQMLLSATKERIDFLPHYD
TLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGIRSIQIKLLFDDSHGKPAVAV
IDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPLPVPRSLNSDISYFGVGGKQA
VFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSTHITSDD
ERFLHNLILEERDKESFTAVVITGVQPDHMQYLKNYFHLWTRQLAHIYHYYVHGPKGNEA
NAVTKDVSPFNNIDIQISMFEKGKVPKIVNLREIKDDMQTLYINTAADSFEFKAHVDGEG
IVEGIIRYHPFLYDRETYPDDPCFPSKLNDDDDDDDCFIVEKGARGKRPIFECFWNGRLI
PYTTVEDFDWCAPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTL
FTRIFNGQEQRMKIDREFALWLKDCHEKYDKQIKFTVYKGVTTRTDLPSKRMQSPWTMYA
AIEWDGKTYRTGQLVKTVKTLPIFYGSIEKFFLYGDHDGDIFATGGEVQIALEPQALYAE
MKTIPISKLDRTVSDKAVKKYIEDEMARLPDKLSVTWPEGDELLPNETRFAGTPIGALRI
EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSPTGNKEIISHISQHGGKWPYWFKKME
NLQKLGNYTLKLQVVLNESNADTYAGRPLPSKIFKFTIIEGKPEKFSVGLLELPFRVGVP
FNIPLELQDEFGHATQLGTGIKPILEASGLTLQYEEITAETKCVIKGVTAKGSINSCQGK
NFNLKVTLPGLKEDTQIFKIRLQPGPPRQLKVKPDSDILKIENGTAFPFQVEVLDESGNI
TAQPKLIVHCKFLGASNLPVYSVDCSNAGTNILTGPVIHVQNIKKDQILKARIEILSCKD
VPPVEKIIKLLPSSHVARLQVLSVDGQKAIQIKHQDEINWVAGDVMHNLIFQMYDEGERE
IHVTPAVAEKIKVNWTPRINREQLIQGLLPDVKVPTSVKDVRYCLITYLDDHVSLESAFT
VRPLPDEPKHIKCKLKGPNTLQVGEELQSEIDVMITDQYGNQVQTVTSACVNSLGVSGPG
LDKSNLKITWQESTLTMRVKGIRFKPCLLGSKELCFAWREFSDFLRVNLTAGSPAKLQFV
DWPELEKPVAVINGRELQKPLIVQLCDQWGNPSPEPNVKISLTKGNNLKIVPSNQQHKTD
ENGRANLGVISIHAPRGEHTLQLKASHGKTTLDCPIITLNVLPDPEKPVCLNVKYDKNAS
FPAGGTFPDFMVSVLSEDDNIIKNINPARISMKMWEAQSSGTRTPIDVTTFSCSKVKDDK
EDGFFYFRDKVIPERVGTYSIQFTFAMDKTNMLSSDQIIVEVVPNDPVRLLPDSLPATPA
VSNVRTLNSRTLVKDLYLHVMDEYNNHTGIDLVGRIIAKIKSPNEDDIEIPQFQGKVSTV
EFPFDRGSAEINLVLAENSPGRDSTEYILVFEPDLPALKKPLEPYRLSFMFYNDFKKQQQ
MATLTRERDQLSQSIGVYRNWFDTTNQLVTEMKCQVKEAETRETHLKNELKKHQIELPQT
NTLQYVDSLIKQKMLDQEGVMKQPRRTCTLPNYPKGNQDILGKIAHLAQIEDNEAAKVIS
WHLASDMDCVVTLTTEAARSIFDETQGRQQVLPLDSIYKKTLPDWNRPLPHLRNGKIFFR
PIGNPVFARDLLTFPDNVEHCQTVFGMLLGDTIIIDNLDAANHYRKEVVKITHCPTLLTR
EGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPMPKLYSTLSGQIDLLQQYRAAVVKLDKV
NKDLDLHLQSLNTPEMQKKKQELAEQEKNLKLIEQKLGMTPSDKVTESLLQPILLDMSDT
PIPPKRMRRETVKKLYSSEEWISSPTKKQQQQQQQQLLQIPASELNGTPRKRKA
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggcgggaggcagccgtggaggtcgcaggccggtgctgctgacgcctcgc
ggcagcggggaccgcactgtctttctctttgaccgccgccgggagcaggcggatccggac
gagaaagtgctcagctacggcaaggacaactaccgcggcttccgcagcgccgtctgccag
gcatttggcatagctactgatgaaaactttgttatcaccacaacaaacaggaaggaaatt
acagaagataacttcagagaacttgttcaggatggagttactttgtatctgctacagtca
gttgatcaaatgctgctttcggcaaccaaggagcgaattgacttcctgccccactatgac
acacttgtcaaaagtggcatgtacgagtactatgccagcgaaggccaaaatcctttgcca
tttgcccttgctgagttgattgacaattctctgtcagctacgtcacgaaatactggtatt
cggagcatacagataaaattgttatttgatgactcccatggaaaaccagctgttgctgtg
attgataatggaagaggaatgacttctaaacaacttaacaactgggctgtatatagattg
tcaaagtttacaagacaaggtgactttgagagtgatcattcaggatatgtacgccctttg
ccagtgcctcgtagtttaaatagtgatatctcatattttggagttggaggcaaacaagca
gtgttcttcgttggacagtctgccagaatgataagcaaacctgcagattctcaggatgtt
catgaacttgtcctttctaaagaagattttgaaaagaaggagaaaaacaaagaagcaata
tatagcggatacattcgaaacagaaagccatctgactctactcacatcacaagtgatgat
gaaagatttcttcataatctaatattagaagaaagggataaagagagttttacagcagtt
gtcattacaggtgtacaaccagatcatatgcaatacttgaaaaattactttcatctttgg
acaaggcagctggcacatatctatcactattatgtccatggaccaaaaggaaatgaagct
aatgctgtaacaaaagatgtaagccctttcaacaacattgacattcagatttcaatgttc
gaaaaaggaaaagtaccaaagattgttaatcttagggagatcaaagatgacatgcagaca
ttgtatataaatactgcagcagatagttttgagtttaaggcacatgttgacggagaaggt
atagtggaaggcatcatccgatatcatcccttcctgtatgatagagaaacatatcctgat
gatccatgttttccatcaaaattaaacgatgatgatgatgatgacgactgctttatagta
gaaaagggtgccaggggaaaaaggcctatttttgaatgtttttggaatggaagattaata
ccatacacaactgtggaagatttcgactggtgtgctcctccaaagaagaggggattagca
cctattgaatgctacaacagaatttctggtgcattatttaccaatgataagttccaggtc
agcacaaacaaactcactttcatggatctggagttgaagctaaaagataagaatactttg
ttcacgagaatcttcaatggacaggagcagcgaatgaaaattgacagagaatttgctttg
tggctcaaagactgtcatgaaaaatatgacaaacagataaaattcacagtttataaagga
gtaactacacgtactgatttaccatccaaaagaatgcagagcccttggacaatgtatgct
gcaatagagtgggatgggaagacatacagaactggacagcttgtgaaaactgttaagact
cttccaatattctatggaagtattgagaaattttttttgtatggagatcatgatggagat
atatttgccactggaggagaggttcaaattgctttggaacctcaggcattgtatgctgaa
atgaaaactattccaatctcaaaacttgacagaacagtgtctgacaaagctgttaaaaaa
tacatagaagacgaaatggcaagacttcctgacaaattatcagtaacatggcctgaagga
gatgagttattaccaaatgaaacaagatttgctggtacaccaataggagcattaagaata
gaaattttgaataaaaaaggagaagcaatgcaaaaactcccaggtacaagtcacggaggt
tcaaagaaacttcttgttgaactcaaggttattttacattcacctactgggaataaagaa
ataatttcccatatcagtcagcatggaggcaaatggccatactggtttaaaaaaatggaa
aatcttcagaaacttgggaactacaccttgaaactgcaagtagtattgaatgaaagtaat
gcagacacttatgccggaaggcctctaccatctaaaatatttaaatttactattatagag
ggcaaaccagagaagttttcagttggtcttttagagcttccttttcgagttggagtacct
tttaatattcctttggaactgcaggatgaatttggtcatgcaacacagttgggaactggc
attaaaccaattcttgaagctagtggattgacattgcagtatgaagaaataactgcagaa
acaaagtgcgtcattaagggtgtcactgctaaaggcagtataaatagttgccagggcaag
aactttaatctgaaggttacccttcctggtttgaaagaagacacacaaatctttaaaata
agattgcagcctggtcctcctcgtcaattgaaagtaaaaccagattctgacattctaaag
attgaaaatggtacagctttcccctttcaggttgaagtactggatgaatcaggaaatata
acagcacagccaaagttgatagttcattgtaagtttttaggtgcttcaaaccttcctgtg
tattctgtggactgcagtaatgcaggaacaaacattttaactggtccagttatacatgta
cagaatatcaagaaagaccagatactgaaagcaaggattgaaatacttagttgtaaagat
gtgccaccagtggaaaagattattaaacttcttcctagcagtcatgttgcaagactacag
gttttaagtgtggatggacaaaaagcgattcaaattaaacatcaggatgaaatcaactgg
gttgctggcgatgtcatgcacaaccttatatttcagatgtatgatgaaggagaaagggag
atacatgtaactccagctgtggcagaaaaaatcaaggttaactggacacctagaattaac
agagaacagttgattcagggattattgcctgatgtaaaagtaccaacatcagtaaaagat
gtacgttactgtctaattacttaccttgatgaccatgtgtctttggagagtgcattcaca
gtcagaccacttcctgatgaacccaaacacattaaatgtaaattaaaaggaccaaacaca
ctgcaggtgggtgaagaactacaaagtgaaattgatgtaatgattacagatcagtatgga
aatcaggttcagacagtaacatctgcatgtgtaaattccctaggagtttctgggcctgga
cttgataaatcaaatttgaaaataacttggcaggaaagtactctaacaatgagagtaaaa
ggtattcggtttaaaccttgtttacttggtagcaaagaattgtgctttgcttggcgtgaa
ttttctgactttctcagagtaaacttaactgcaggatcccctgctaaattgcagtttgtg
gattggccagagttagaaaagcctgttgcagtgattaatggtagagaattgcagaagccc
cttattgttcagctgtgtgatcagtggggaaatccatctcctgaacctaatgtcaaaatc
agccttacaaagggtaacaacttaaagattgttccttcaaaccagcaacataaaacagat
gaaaatggtagggctaacctgggagttattagtattcatgcacctaggggagaacacact
ttacagcttaaggcctcacacggcaagaccacattagattgtcctataatcacattaaat
gtcctgcctgatcctgagaaacctgtctgcttgaatgttaaatatgacaaaaatgcttct
tttccagcaggaggtaccttccctgattttatggttagtgttctttctgaagatgacaac
attattaaaaatattaatccagcacggatttctatgaaaatgtgggaagcacagagcagc
ggaactaggacaccaattgatgttacaacatttagctgtagtaaagtgaaggatgacaag
gaagatggcttcttctacttcagggataaagtgattccagagagagtgggcacttacagt
atccagtttacctttgcaatggataagacaaatatgctcagcagtgaccagattatagtt
gaagttgtacctaatgaccctgtacgcttgttacctgattctttaccagctactccagca
gtttccaatgttcgaactcttaatagccgtacactggtcaaggatttatacctccatgta
atggatgaatacaacaaccatactggaattgatctagttggcagaataatagcaaaaatt
aagagccccaatgaagatgatatagagatcccacagtttcaggggaaagtcagtacagtt
gagtttccatttgacagaggatcagctgaaattaatctagtgctggctgaaaacagtcct
ggaagagatagcactgaatatattcttgtatttgagccagatctgccagctttgaaaaaa
cctttggaaccatatcgtttgtcatttatgttttacaatgatttcaagaaacagcaacag
atggcaacacttacaagggagagagaccaattatctcagtccataggtgtttacagaaat
tggtttgatactactaatcagcttgtaactgaaatgaaatgtcaggttaaagaagctgaa
acaagagaaactcacctgaagaatgaactgaaaaaacaccaaattgaattaccacagaca
aacacacttcagtatgtggattctcttataaaacaaaagatgttggatcaagaaggagta
atgaaacagccaaggcgaacttgtactctcccaaactatccaaaaggcaaccaggatatt
ttaggcaagattgcacatttagctcaaattgaggacaatgaagcagcaaaagtcatctct
tggcatttggcaagcgacatggactgcgtagtcacgctgactactgaagccgctcgttct
atttttgatgaaactcaaggccgacaacaagtgttaccccttgattctatttacaagaag
acactgcctgattggaacagaccgttacctcacttaagaaacggaaaaatcttcttcaga
cctattggaaatcctgtgtttgccagagatctgttaacatttccagacaatgtagagcat
tgtcaaacagtgtttgggatgctcttgggtgacactatcattatagataacttggatgct
gccaaccattacagaaaagaggttgtaaaaattacacattgccctactttgctgactagg
gaaggagacaggattcgcagcaatggaaaatttggaggcctccagaataaagctcctcca
atggacaaactcagaggaatggtatttggagcacccatgccaaaactttactctacttta
tctggacagatagatcttcttcagcagtaccgtgcagcagtagtgaaacttgataaagtg
aataaggaccttgatttacatttgcagtcacttaacactccagaaatgcaaaagaaaaaa
caagaacttgccgaacaagagaaaaacctcaagctaatagaacaaaaattgggtatgact
ccatcagataaagtcactgaatcattacttcagcctatactgttggatatgtctgacacc
cccatccctcccaaaagaatgcgaagagaaacagtaaaaaaattgtatagctcagaagaa
tggatctcctctcccacaaagaagcaacagcagcagcagcaacagcaactgctgcaaata
cccgcttcagaacttaatggaactccacgaaagagaaaggcatag
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