Serratia ureilytica: J0X03_21925
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Entry
J0X03_21925 CDS
T07185
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
suri
Serratia ureilytica
Pathway
suri00020
Citrate cycle (TCA cycle)
suri00270
Cysteine and methionine metabolism
suri00620
Pyruvate metabolism
suri00630
Glyoxylate and dicarboxylate metabolism
suri00680
Methane metabolism
suri00710
Carbon fixation by Calvin cycle
suri00720
Other carbon fixation pathways
suri01100
Metabolic pathways
suri01110
Biosynthesis of secondary metabolites
suri01120
Microbial metabolism in diverse environments
suri01200
Carbon metabolism
Module
suri_M00009
Citrate cycle (TCA cycle, Krebs cycle)
suri_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
suri_M00012
Glyoxylate cycle
suri_M00168
CAM (Crassulacean acid metabolism), dark
suri_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J0X03_21925 (mdh)
00620 Pyruvate metabolism
J0X03_21925 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
J0X03_21925 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
J0X03_21925 (mdh)
00720 Other carbon fixation pathways
J0X03_21925 (mdh)
00680 Methane metabolism
J0X03_21925 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
J0X03_21925 (mdh)
Enzymes [BR:
suri01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
J0X03_21925 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
QSR07028
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All DBs
Position
complement(4628411..4629349)
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AA seq
312 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALQGADVVLISAGVARKPGMDRSDLFNVNAGIVRNLIEQVAKTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTSLDIIRSNTFVAELKGKQPEELNVPVIGGHSGV
TILPLLSQIPGVSFTDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEKGVVECAYVEGDGKYARFFAQPLVLGKNGVEERKDIGTLSAFEQKALNEMLDVLH
KDIELGEKFINN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcagttctcggtgctgctggcggtatcggccaggccctcgcccttctactc
aaaacccagcttccttcaggttctgaactctctctttacgacattgcccccgttacccca
ggcgttgccgtcgacttaagccacatcccaaccgcagttaaaatcaaaggcttcagcggc
gaagacgcgaccccggctctgcagggtgctgacgtggtgctgatttccgccggcgtggcc
cgtaagccaggcatggatcgctctgacctgttcaacgttaacgccggcatcgtgcgtaac
ctgattgagcaagtggcgaaaacctgcccgaaagcctgcatcggcatcatcaccaacccg
gttaacaccacggtcgccatcgcggcggaagtgctgaaaaaagccggcgtttacgacaag
aacaaactgttcggcgtgacttcgctggatatcatccgttccaacaccttcgtggccgag
ctgaaaggcaagcagccggaagagctgaacgtgccggtcatcggcggccactctggcgtg
actatcctgcctctgctgtcgcagatccctggcgtgagcttcaccgatcaggaagtggcg
gatctgaccaaacgcattcagaacgccggcaccgaagtggtggaagccaaagccggtggc
gggtctgctacgctgtccatgggccaggcggccgcgcgtttcggtctgtctctggtgcgc
gcactgcagggcgagaaaggcgttgtggaatgcgcttacgttgaaggcgacggcaaatac
gctcgcttcttcgcacagccgctggtgctgggtaaaaacggcgttgaagaacgcaaggat
atcggcacgctaagcgccttcgaacagaaagcgctgaatgagatgctggacgtgctgcac
aaagatatcgaactgggcgagaagttcatcaataactga
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