Candidatus Solibacter usitatus: Acid_7316
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Entry
Acid_7316 CDS
T00412
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sus
Candidatus Solibacter usitatus
Pathway
sus00300
Lysine biosynthesis
sus00550
Peptidoglycan biosynthesis
sus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Acid_7316
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Acid_7316
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sus01011
]
Acid_7316
Enzymes [BR:
sus01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Acid_7316
Peptidoglycan biosynthesis and degradation proteins [BR:
sus01011
]
Precursor biosynthesis
Amino acid ligase
Acid_7316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABJ88227
UniProt:
Q01Q43
LinkDB
All DBs
Position
complement(9180299..9181783)
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AA seq
494 aa
AA seq
DB search
MNLGEILSSVKLPRPLAPELAQTEVTGLAYDSRRVTPGVLFFAFPGSKADGREFAADALA
RGAVAVISESLAPPDLAARWIQVEHGRHALALAARTFFGRPDERLGLTGITGTNGKTTTA
YLTDSVLRAAGGVTAMIGTIEYHLAGRVLKAVNTTPESLDLLQIFSDLLRAGGTHVTMEV
SSHALALGRVHGLNFHTAVFTNLTRDHLDFHGDMERYFAAKQMLFEGAGGNPPRFAVLNT
DDEYSRRLRLHARTERLWYGMTPEADLRPRHIVSSFKGLRFDLQFRKQRFTIESPLIGKI
NVYNILAACATGFSYGLAPEVVARGIASLKAVPGRFERVDEGQPFVVVVDYAHTDDALRN
VIAVARGLNPRRVITLFGCGGDRDRAKRPLMGKAAAEASDFVVLTSDNPRSEDPLTIMND
ALVGIRRTDVAHVVEPDREAAIRRAIKEAREGDIVILAGKGHETYQVLKDKTIDFDDRAV
AREVLKGYGYHQTQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggcgaaatactttcgagcgtcaagctgccgcggccgcttgcgcccgaactc
gcccaaactgaagtcaccggcctggcttacgattcgcgacgcgtcacgcctggcgttctg
ttcttcgcattccccggcagcaaggccgatggccgcgaatttgcggcggatgcgctggcg
cgcggagcggtggcggtgatcagcgaatcgctcgcgccgccggacctggccgcgcggtgg
attcaggtggaacatggccggcatgcgctggcgctggccgcgcgcactttcttcggccgt
ccggacgagcgcctcgggctcacgggcatcactggcaccaacggcaagactaccacggcg
tacctgaccgattccgtgctgcgcgccgcgggcggtgtcacggcgatgatcggtaccatc
gagtaccacctggcgggacgcgtgctcaaggcggtcaacaccacgccggaatcgctcgac
ctgctgcaaatcttctccgatctgctgcgtgccgggggcacgcatgtcacgatggaagtc
tcgtcgcacgcgctcgcgctcggccgggttcacgggctcaacttccacaccgccgtcttc
accaacctcacgcgcgaccacctggatttccacggcgacatggagcgctatttcgccgcc
aagcagatgctcttcgaaggcgcgggcggcaaccctccgcgcttcgccgtgctcaacacg
gacgatgaatactcgcgccggttgcgccttcacgcgcgtaccgagcggctttggtacggc
atgacgcccgaggccgacctgcgtccacgccacatcgtcagcagctttaaagggctgcga
ttcgacctccagtttcgcaagcagcgcttcaccatcgaatcgccgctcatcggaaagatc
aacgtctacaacattctggctgcctgcgcgaccggcttctcctacgggctcgcgcccgaa
gtggtggcgcgcggaattgccagcctcaaggcagtgcctggacgcttcgagcgcgtggac
gaaggccagccgttcgtggtggttgttgactatgcgcataccgacgatgccctccgcaac
gtgatcgcggtggcgcgcggcctcaatccacggcgcgtcatcactctcttcggctgcggc
ggcgaccgcgaccgtgccaagcgtcccctgatggggaaggccgcggcggaagccagcgat
ttcgtggtgctcaccagcgacaacccgcgctcggaagatccgctgacgatcatgaatgac
gctctggtagggatccggcgaaccgacgtggcccacgtggtggaacccgatcgcgaagcg
gcgattcgccgggcgattaaggaagcgcgcgaaggcgacatcgtgattctggccggcaaa
ggccacgaaacttatcaggtgctgaaggacaaaaccatcgacttcgacgatcgcgctgtg
gcgagagaagtgctgaaggggtatgggtatcaccagacccagtga
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