Sutterella faecalis: FG381_04145
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Entry
FG381_04145 CDS
T06027
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sutk
Sutterella faecalis
Pathway
sutk03030
DNA replication
sutk03410
Base excision repair
sutk03420
Nucleotide excision repair
sutk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sutk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FG381_04145 (ligA)
03410 Base excision repair
FG381_04145 (ligA)
03420 Nucleotide excision repair
FG381_04145 (ligA)
03430 Mismatch repair
FG381_04145 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sutk03032
]
FG381_04145 (ligA)
03400 DNA repair and recombination proteins [BR:
sutk03400
]
FG381_04145 (ligA)
Enzymes [BR:
sutk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FG381_04145 (ligA)
DNA replication proteins [BR:
sutk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FG381_04145 (ligA)
DNA repair and recombination proteins [BR:
sutk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FG381_04145 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FG381_04145 (ligA)
MMR (mismatch excision repair)
DNA ligase
FG381_04145 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FG381_04145 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
Zn_Ribbon_TF
DUF3275
BRCT_2
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
QDA54213
LinkDB
All DBs
Position
complement(1035978..1038185)
Genome browser
AA seq
735 aa
AA seq
DB search
MTSLFDETEAAPLSAPTKTPAVQKKSAPAEPLPADSDPFGAKAAAAAVPPEKARERMAEL
EAEIERWSYEYYVLDAPSVPDAEYDRAWNELEALEARFPKLKSPTSPTLRVGGAVREGFR
KVSHKIPMLSIHTETDFSSEGAKAFDERVRHDLGLTESDPPVEYDCELKFDGLALSLRYE
SGVFVSAATRGDGSVGEDVTENVRTIRSIPLKLSGKYPQVLEVRGECIMHKKDFEALNAR
QESEGEKLFANPRNAAAGSLRQLDSSITARRTLHFYAYSLGECSEHFADTQSAVLDRFES
LGFPVAKMRRVVHGAEALAQFHEDVLRMRGDLPFEIDGVVYKVNSLELEAELGFIAREPR
WACAHKYPPEEALTQVLGIDVQVGRTGRLTPVARLAPVYVGGVTVSNATLHNEDHVTEEL
DLRVGDTVVVRRAGDVIPEILRVVKERRPKDAVPFRMPQVCPVCGSAVIRDEEEKDMRCT
GGLFCPAQMKLSIVHFASRRAMGIDGLGEKIVEMLVDEKLVETPADIFSLKAEDLTAPIQ
ATVGTPKPVKRMGPKAAENLLASIEKAKSTTLARFIYALGCRHVGEATALALANHFGTLD
ALEGAEVDALLTVPDVGEVIAESIHAFFREPHNRTVIEALIHAGVHWPAVEKRSAESLVA
GKTFVLTGTLPTLTRDEAKDLLTAQGARVSGSVSRRTDYVVAGTEAGSKLAKAEELGIRV
IGEEELKKLLAGTPL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctttttgacgagaccgaagcggcgcctctttcggcgccgacgaagacccct
gcggtccaaaaaaagtccgcccctgctgaaccgcttcctgccgattccgaccccttcggc
gcgaaggcggcggctgccgcagtgccacccgaaaaagcgcgcgaacgcatggcggagctc
gaggcggagattgagcgctggagctacgagtactacgtgctcgatgcgccgagcgtgccg
gatgcggagtacgaccgcgcctggaatgagctcgaagcccttgaagcgcgctttccgaag
ctgaagagtcccacgtctccgactcttcgcgtgggcggcgccgtgcgtgagggcttccgc
aaggtttcccacaagattccgatgctctcgattcatacggaaacggacttttcaagcgaa
ggcgcgaaagcctttgacgaacgcgttcgtcatgatctgggtctcacggaatccgatcct
cccgttgaatacgactgcgaactgaagttcgatggactggcgctctctctgcgctacgaa
tctggcgtcttcgtttcggcagccacccgcggcgacggctccgtgggcgaggacgtgacg
gaaaacgtccgcacgatccgctcgattcctctgaagctctccgggaaatatcctcaggtg
cttgaagtccgcggcgaatgcatcatgcataagaaggacttcgaggcgctcaacgcccgc
caggaatcggaaggcgaaaagctcttcgccaatccgagaaacgccgctgccgggtcgctc
cggcagctcgacagcagcattaccgccaggcggacgcttcatttttatgcctattcgctc
ggcgaatgttctgaacatttcgcagatacgcagagcgcggtgctcgaccgcttcgagtcg
ctcgggttcccggtcgccaaaatgcgccgcgtcgtccatggtgcagaggcgcttgcgcaa
tttcacgaggatgtcctccggatgcgaggcgaccttccttttgaaatcgacggcgttgtc
tataaggtcaacagccttgagctcgaggccgagctcggcttcatcgcgcgcgagccccgc
tgggcctgcgcgcacaagtacccgccggaggaagccctcacgcaggttctcgggatcgac
gttcaggtcggccgcacggggcgcctgacgcccgttgcgcgcctggcccccgtttatgtc
ggcggcgtgacggtctcgaacgcgacgctccataacgaagatcacgttaccgaggagctc
gaccttcgcgtcggggacaccgtggtggttcgccgggcgggcgacgtgattccggaaatt
cttcgcgtcgtgaaggagcgtcgtcccaaggacgcagtgcccttccgcatgccccaggtc
tgccccgtctgcgggagcgccgtcattcgggacgaagaagaaaaggacatgcgctgcacc
ggcggtctcttctgtccggcgcagatgaagctctcgatcgtgcacttcgcctcccgccgc
gcgatgggaatcgacgggttgggcgaaaagatcgttgagatgctcgtcgacgaaaagctc
gttgaaacgcctgccgacatcttttcgcttaaagccgaagacctgacggcacccattcag
gcaacggtcggaacaccaaagcccgttaagcgcatggggccgaaggcggctgagaacctt
cttgcaagcattgagaaggccaaatcgacgacgctcgcccgcttcatttacgccctcggc
tgccgccatgtgggcgaagccacggcgcttgctctcgccaaccatttcggaacgctcgat
gcacttgaaggcgccgaggttgatgcgctgcttactgtcccggatgtgggtgaagtgatt
gcggaaagcattcacgcgttcttccgggaacctcacaaccggaccgtcattgaggcgctc
attcatgcgggcgttcactggccggcagtggagaagcgctccgcggaaagccttgttgcc
ggaaagacttttgttctgacgggaacgctcccgaccctcacgcgcgatgaagcgaaggac
cttctcacggcccagggcgcgcgcgtctcgggatcggtcagccgccgcacggactacgtg
gtggcgggtacggaagccgggagcaaacttgccaaggccgaggaactcggcatccgcgtc
atcggcgaagaggagctcaaaaagctcctcgccggcacacccctttaa
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integrated database retrieval system
