Stella vacuolata: STVA_42560
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Entry
STVA_42560 CDS
T06335
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
svc
Stella vacuolata
Pathway
svc00540
Lipopolysaccharide biosynthesis
svc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
STVA_42560 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svc01005
]
STVA_42560 (lpxC)
Enzymes [BR:
svc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
STVA_42560 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
svc01005
]
Lipid A
STVA_42560 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BBK44236
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All DBs
Position
4509085..4510020
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AA seq
311 aa
AA seq
DB search
MNAIRPSACPAPRRTIKSAIHCTGVGLHSGRRTLLRLVPAEAGTGIVFRRIDLPGGPEVR
ALWDRAIESPLCTTLVEDGVTVSTTEHLMAALAGMEIDDAVVEIDGPEVPIMDGSAAPFV
FLIECAGAVELAEPRRAIRILKEVRVGDSRAWAALRPGPASAFSFEIDFPHPVIAQQSFG
VTLHNGTFKNQLSRARTFGFLHEVDKLRSLGLARGGSLDNAIVVADDGILNEEGLRYADE
FVRHKIVDSIGDLYLAGGPILGRFEGFRSSHALSARLLRAVMTDPSAWSVDDMVEPMMTP
AWETGPLAATA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgatcagaccctcggcctgtccggcgccgcgtcgtaccatcaagtcggccatc
cactgcacgggcgtcggcctgcattcgggacggcggacattgctgcgtctggttccggcc
gaggccggcacgggcatcgtcttccgccgcatcgacctgccgggcgggcccgaggtccgg
gccctgtgggaccgcgccatcgaatcgccgctctgcaccaccctggttgaggacggcgtc
accgtgtccacgaccgagcacctgatggcggccctggccggcatggagatcgacgacgcc
gtggtcgagatcgacgggccggaagtgccgatcatggacggcagcgcggccccgttcgtc
ttcctgatcgagtgcgcgggcgcggtcgaactggcggagccgcggcgcgcgatccgcatc
ctgaaggaagtgcgcgtcggcgacagccgcgcctgggcggccctgcgccccggcccggcc
tcggccttctcgttcgagatcgacttcccccatccggtgatcgcccagcagagcttcggc
gtcacgctgcacaacggcaccttcaagaaccagttgagccgcgcccggaccttcggcttc
ctgcacgaggtcgacaagctgcgctcgctgggcctggcccgcggcggctcgctggacaat
gcgatcgtggtcgccgacgacggcatcctcaacgaggaagggctgcgctacgccgacgag
ttcgtccgccacaagatcgtcgacagcatcggcgacctgtacctggccggcgggccgatc
ctcggccggttcgagggtttccggtcgagccacgccctgtcggcccgcctgctgcgggcg
gtgatgaccgacccgtcggcctggagcgtcgacgacatggtggagccgatgatgacgccg
gcctgggagacgggcccgctggccgccaccgcctga
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