Solanum verrucosum: 125831200
Help
Entry
125831200 CDS
T11474
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sver03400
]
125831200
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
125831200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
zf-RING_UBOX
ResIII
zf-C3HC4
zf-RING_5
DEAD
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125831200
NCBI-ProteinID:
XP_049366342
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MRLRSRPSSSSAKGKQSRQYQDSSDEDDLLSISSDSDYIGNNDEDVADEADEVDNLIEEV
LCSIRTKRNGGKKRIETKEDQGEEEEHVDWVMNEVGRGGEVDAGYLQLIERIEDRKKIRE
KNQKKRPTLLWEIWEEENDSWMAENYPNDPDFNSQDELVTETAQPPSDLIMPLLRYQKEW
LAWALKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQVISGSSLLSPAPCTSQELP
AVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANRVKNIDKFAEYDFVITTYSTV
EAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKTGGKPSKLK
KNPIEGDSEIDTGKRGRGKGIKRKSETDAGSVDDSACAGQDMSMRKSILHSVKWNRIILD
EAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCD
CRVLDYSSSECPHCPHKPIRHFCWWNRYIASPIQSQGNHGTGRDAMVLLKHKILKSILLR
RTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIF
DLLTRLRQAVDHPYLVVYSSTALARRESTNDAGSVEQPCGLCHDPVEDPVVTSCTHVFCK
SCLIDFSASVGQVSCPSCSKPLTVDFTANDKGDQKSKATIKGFRSSSILNRIHLDDFQTS
TKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDS
AIRRFTEDPDCRIFLMSLKAGGVALNLTVASQVFLMDPWWNPAVERQAQDRIHRIGQYKP
IRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFVT
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccgttctcgtccttcatcgtcttccgccaaaggaaaacaaagccgccaatat
caggacagctctgatgaggatgaccttctttctatatcctcggattctgattatattgga
aacaatgatgaagatgtagctgatgaagcagatgaagtagataatttaattgaggaagtg
ctatgttccattagaacaaaaagaaatgggggcaaaaagaggattgaaacaaaagaagat
cagggagaagaagaggaacatgtagattgggtaatgaatgaagtaggaaggggtggtgaa
gtagatgctggctaccttcaattgatagagaggatagaggataggaagaagatccgtgaa
aagaatcaaaagaagagacccactttgctgtgggaaatctgggaagaagaaaacgatagt
tggatggctgaaaactatccaaatgatcctgacttcaatagtcaggatgagttggtaact
gaaactgctcagccaccatctgatttgatcatgcccttgctgaggtaccagaaagagtgg
ttggcttgggcattgaagcaagaagaatctactgctagaggtggtattcttgctgatgag
atggggatggggaagactgttcaagccatagctcttgtgcttgctaaacgcgaactaggg
caagtaatttctggttccagtttgctctcacctgccccttgtacttcccaggagctccct
gcagtgaaaggaaccctagtcatatgtcccgttgttgctgtgattcagtgggttagtgag
attgaccgcttcaccactaaaggaagcaacaaaattttggtttatcatggcgccaacagg
gtgaagaatattgacaaatttgcagaatatgattttgtcatcactacatattccacagtg
gaggctgagtaccggaaaaatgtgatgccaccaaaagaaaaatgtcagtggtgtggaaag
tctttttatgaacaaaagctttctgttcaccagaagtacttttgtggaccagatgctgtt
aaaacggctaaacaatcaaagcagcagagcaagactggaggaaaaccgtcaaagctgaaa
aagaatcctattgaaggtgattcagagattgatacgggtaaaagaggccgtgggaaggga
ataaagcgcaaaagcgagactgatgctggttctgttgatgattcagcctgtgccggtcaa
gatatgtccatgaggaagtcaattttgcactctgtgaaatggaatcgtatcattttggat
gaggcccattacgtaaaagatagacgctccaacactacaagagctattcttgcgctagaa
tcttcttataagtgggccttaagtggtactcccctccagaaccgtgtaggagagctgtac
tcacttgtccgtttcctgcaaattgttccttactcgtactacttctgcaaagattgtgat
tgcagagttctggactatagctcatccgagtgcccacattgcccccacaaacctattcgg
cacttttgctggtggaatagatatattgcctcacccatacaatctcaagggaatcatggg
actggaagagatgcgatggttttgttgaaacacaaaattttgaaaagcatattgctgaga
cgtactaaaaagggaagggctgctgatcttgcacttcctccaaggattgttactttgcgg
aaagattctttggatgttaaagaagaagactactacacatcactgtacaatgaaagccag
gcacaatttaatacatacattcaagctggtactttgatgaataactatgctcacattttt
gatctactcacacgcctgcgacaggcagttgatcatccttaccttgtggtatactcaagt
actgctttggctagaagagaaagcacaaatgatgctggctctgttgaacagccatgtggt
ttatgtcatgatccagtagaagatccagttgttacttcttgcacacatgtcttttgcaag
tcatgtctaatagatttttctgcaagtgtgggacaagtttcatgcccttcatgttctaaa
ccacttacagtggatttcacggcaaatgataagggggatcagaaatctaaagccacgatc
aaagggtttaggtcctcaagtatactgaacagaattcatcttgatgatttccagacaagc
acaaaaatagaggctttgagagaagaaataaggttcatgattgaaagagatggttctgcg
aaagcaatagtcttcagtcaattcacatcatttttggatctgatacactattctctacag
aagtcgggcgtcagttgtgttcaattagatggatccatgtctatgactgccagagattct
gcaattagaagattcaccgaggatccagattgcaggatattccttatgagcttgaaagct
ggaggtgttgccctcaatcttacagtggcatcacaagttttcttgatggatccttggtgg
aatcctgctgtggagcggcaagcccaagatagaatccatcgaatagggcagtataaacca
atcaggattgtgagatttgtgattgagaatacaatcgaggagaggatcttaaagttgcaa
gagaagaaggagctagtttttgaagggacggtcggtggctcttctgaggcgttggggaaa
ctaacagaggcagatttgaagttcttgtttgtaacctaa
DBGET
integrated database retrieval system
