Solanum verrucosum: 125835839
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Entry
125835839 CDS
T11474
Name
(RefSeq) sm-like protein LSM3A
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
sver Solanum verrucosum
Pathway
sver03018
RNA degradation
sver03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125835839
09123 Folding, sorting and degradation
03018 RNA degradation
125835839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125835839
03041 Spliceosome [BR:
sver03041
]
125835839
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125835839
mRNA degradation factors
5'-3' decay
Lsm complex
125835839
Spliceosome [BR:
sver03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125835839
Complex C
U2 snRNP components
125835839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
125835839
NCBI-ProteinID:
XP_049370899
LinkDB
All DBs
Position
Unknown
AA seq
97 aa
AA seq
DB search
MGSEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRATRRTIPFLFVRGDGVILVSPPLRTT
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgaagaggagagcacagtgaaggagccattggatctcataaggcttagtctt
gacgagagaatctacgttaagctccgctccgacagagaactccgtggcaaacttcatgct
tatgatcagcatcttaatatgattctaggtgatgttgaagaaattgtgaccacagttgag
attgatgatgaaacatatgaagagatagttcgggcaacaagacggaccatcccattccta
tttgttcgtggagatggtgtcattctggtgtctcctccactccggacaacttga
DBGET
integrated database retrieval system