Solanum verrucosum: 125836430
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Entry
125836430 CDS
T11474
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
sver Solanum verrucosum
Pathway
sver03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125836430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125836430
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125836430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_7th
Ig_NUP210_1st
Big_2
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_13th
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
125836430
NCBI-ProteinID:
XP_049371554
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MLQFLSLLLLLLLLPLSSPFPATGPHIADVNILLPPKMTHPVEYRLQGSDGCFKWTWDHH
DILAVLPEYNVSNQCSTSARLKSIAPYSGRKETAVYATDVHTGAVIRCKVYIDIFSRIQI
FHSSIKLDLDGLATLRVRAFDTEENVFSSLVGIQFMWDLMPETDGLPHHLNHIPLKDSPL
SDCGGLCGDLAIQTKLENSGVFSDLYVVKGTEIGHEIVSVHLAEPSVKYMEDKIVLTVAE
AISLEPPSPVCVLIGAVVHYSLKVIRGNMPHLVTLPSAFHRWSVSNSSVAQVDRMVGTAK
ALNLGITTVTVEDTRVVGHTQVSSFYVVLPDSLSLYILPPSLSGDHIEGTEPISSMARWY
VVSGREYLIQVRVFSKGTWAQQEVYLTENDDVKLHDDPSEIWSIVPSSNRVGEKGISRIL
KALSYGLGKLTATLTYSTGHEETKEILKVVQEVMVCDQVKFSMDGASGSITLPWAPGVYQ
ELELKVTGGCAMVSGDYKWFSSDMAIVSVSTFGIVQAKRPGKVTIKAVSVFDSLNYDEIA
VEVSLPSSMIVLPNLPVETPVGSYLRAAVTLKTVDGGLFYKCDAFTPSIKWKTGNDAFIV
VDAGETFISEKQESLPIGSEKYVPACAWTYVYAANSGQTMLHATLSKEFQQYDHSTGGSI
VLQATSRIAAFVPLILHPASDGNQFGGYWFNLVQAEADNRLENMEHLYLTPGTSFEVMLR
GGPNRWDQGVEFVESVESLDEHNLRVQDGAIVNQEFTSYGSTYRIKCQDFGIFRLHFKRG
NLIGEGHPLPAVSEVQLSLTCSFPSSIALIADETVNSVEVIQSAAQADRGSGRIRTSPVT
IANGRTVRLSAVGISETGIAFGNSSSLPLKWELKDCDDLAFWDDIHNLAMLSTWEKYLVL
TNATGLCVVRATVTGSVDSVSHRHTLKHFPGSEHDLTDAIRLQLVSSLRVYPEFSLLYLN
HDAKLNLSITGGSCFIDAAVNDTQVVDIIQPAPGLQCVQLLLAPKSLGTALVTVRDVGLA
PPLSAFSVVQVADMEWIKITSGEELSIMEGSSLSIDFLAGVSDGNTFDPSQYVYMNIRVH
IEDHIIELVNEDDFSCCDDGYVNVPNFRIRATRLGITTLYVSARQHTGHEILSQPIKVEV
YAPPRIDPSDIFLVPGASYMLTVRGGPKTSAYIEFVSMDNEVAKVHTATGLVSATSPGNT
TIVTKMYRNGNIFICQAYGEVKVGVPSSAMLNVQSEQLAVGRQIPIIPSLSEGNLFSFYE
LCRNYKWIINDDEVLSFQAADSLHVGNHGMHMSREKGNGLTGYVGDNDLGFIQVLHGRSA
GQTNVTVSFSCDFVAYKSFSESRSYTASISLSVVSELPLALGSPITWILPPHYTTSALLP
SASRTFSKGDPSIGKVTYSILGDCRRKAELEEDDPILIDGSRIRTKESGNLACIQAKDRS
NGRVEVASCVKVAEVTQIRFTAEKLLVHTLAIGAEIDVPIKYYDVLGNPFLEAQDVIPFG
VETNYHDVISVEDAVDGTGNVHLKAISYGRALVRVGFANEPKKSDYVVILVGAHLHPQNP
TLHLGSGLNFSIEGLSDQVSGQWFTSNASIVSVDQLSGHAKAIGEGSVQIIFECSNMKLQ
TTVTVSQPEMMSVDAPREILTNVPLPANGYSFLVKLNDAYRHKYKSAKNRASFLFDCLVD
PPYVGYVKPWVDLDTGNSYCLFFPYSPESLVLATPKSGGIKQDLAVTIKASLIGEQNISG
SASALFVGGFIIPGTEGDSLQLNLTPQFNRSVLTVVGNTDVSIYWHDRERLAVRPIHGED
SQGRSRAQYEIKIRRAEKFKDKLIFTLPATGQIMEVNVNYEPEERRATTANLNLWATAAA
CFILLIVTATVFISYLDQPVRSRPSAPPGTPSVAAPVTPERSSPAGVSEHSPRTPQPFLD
YVRRTIDETPYYRQDFRRRANPQNTY
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagtttctttccctgcttcttcttcttcttctactaccactgtcttctcctttt
ccggcgactggtcctcacattgccgatgtcaacatactgctgcctcccaaaatgacacac
ccagttgagtacagacttcaaggaagtgatggttgcttcaaatggacatgggatcatcac
gatattttagctgtgctgcctgagtacaatgtgagtaatcaatgctctacaagtgcccgc
ttgaagtcaattgccccttatagtggtcgaaaggagactgctgtctatgcgacagacgtg
cacactggagctgttatccgatgcaaagtttacattgacatcttctctaggatccagata
ttccatagttctatcaaacttgaccttgatggcctggctactctacgtgtccgtgccttt
gatactgaagagaatgttttctcgtctttggtgggcatacaattcatgtgggacctaatg
cctgaaactgatggattgcctcatcacctgaaccatatccctttgaaggactctccattg
agtgattgtggtggattatgtggtgacctagctatccaaacaaagcttgaaaatagtggt
gtgttttctgatctttatgttgtaaaggggacagaaattggccatgaaatagtgtctgtt
catttggctgaaccatcagttaaatatatggaagataaaattgtcctaaccgtggcagaa
gctatatcgctggagcctccttcaccggtttgtgtccttattggtgcggttgttcattat
agtcttaaagttatccgcgggaatatgccacatcttgtaaccttgccttctgcttttcac
cgatggtctgtttcaaactcctcagttgctcaggtagataggatggtgggtactgctaag
gctttgaacttgggaataacaacagtaactgttgaagatactagggtggttggtcataca
caagtgtcttctttctatgttgtcctcccagattccttatcgttgtatatattacctcca
tctctttctggtgatcatatagaaggaactgaaccaatatcctctatggcacgctggtat
gtagtttctggtcgggaatatctcattcaagtaagggttttctcgaaaggaacatgggca
caacaagaagtttaccttacggaaaatgatgacgttaagttgcatgatgacccatcagaa
atttggagtatagttccctcatccaatcgcgtcggagagaaggggatatctagaatccta
aaagctctctcatatggtctgggaaaactgacagcaactcttacatatagcactgggcat
gaagaaacaaaggaaattctcaaggttgttcaagaagttatggtttgtgaccaggtgaag
ttcagcatggatggtgcctccggcagtattactcttccttgggcacctggtgtttatcag
gagttggagctaaaggttactgggggctgtgcaatggtgtctggtgactacaaatggttc
tcttcggacatggctattgtgtcggtatctacttttggaatcgtccaggcaaaaaggcct
ggaaaagttactataaaggcagtctcggtttttgattctctaaattatgatgagatagct
gttgaagtgagtttgccttcttcaatgatagtactgcctaatttgccggtggagactcct
gtaggttcatatcttcgagctgctgtgacattgaaaacagtggatggtggcttattctac
aaatgtgatgcttttaccccgtccatcaagtggaaaactggaaatgacgctttcattgtt
gtggatgctggtgagaccttcatttctgaaaagcaagaaagtcttccgattggttctgag
aaatatgtccctgcatgtgcatggacctatgtctatgctgctaattccggtcagacgatg
ctacatgcaacattgtcaaaagaatttcaacagtatgatcactctaccggcggttctatt
gttctgcaagcaacctcacgtattgcagcattcgtacctctcattttgcaccctgcaagt
gatggaaatcagtttggtggttattggtttaatttggtacaggctgaagctgataatcgc
ttagaaaatatggaacatctatatcttacccctggcacatcttttgaagtgatgcttcgt
ggtggacctaatcgatgggatcagggagttgaatttgttgaatccgtggaaagtttggat
gaacacaatcttagggttcaagatggggctatagttaatcaagaatttaccagctatggg
agcacatacagaatcaagtgtcaagattttggaatctttaggcttcatttcaaacgtggg
aatttaattggagaggggcatcctctgcctgctgtatctgaagtgcaattgtcactcaca
tgtagtttcccatcatctatagcattaatagctgatgaaactgttaattctgttgaagtg
atccagtctgcagctcaggctgaccgtggcagtggaaggattcgtacttccccagtcaca
atagcaaatgggcgcacagttcgactatcagctgttggcattagcgagactggaatagct
tttggaaattcatcttctcttcctttgaagtgggagcttaaagattgtgatgatctggca
ttttgggatgatatccacaacttagcaatgctatcgacttgggaaaagtacttggtcttg
acaaatgcaactggactctgtgttgtacgagcaacagttactggatcagttgattctgtt
agccatcgtcacactcttaaacattttccaggctctgagcatgatcttacagatgctata
cgtttgcaacttgtttcatccttaagggtctatccagaatttagcttgttgtatctcaat
catgatgcaaaattgaacctgtcaattactggaggaagttgtttcattgatgctgcagta
aatgatactcaagttgtggatataattcagcctgctcccggtttacagtgtgtacaacta
ctactggctcctaaaagtttgggaactgcacttgtgactgttcgagatgtggggcttgct
ccacctctttctgctttctctgtggttcaagttgcagatatggaatggattaagattaca
tctggagaagaattgagtattatggaagggagttcactatccatcgattttcttgctgga
gtaagtgatggaaatacttttgatccttcacagtatgtttacatgaatattcgtgttcac
attgaggatcatataattgaacttgtcaatgaagatgatttttcctgttgtgatgatgga
tatgtgaatgtgcctaacttcagaatacgggcaacgcgccttgggattaccacactgtat
gtcagtgctagacagcatactggacatgagatactgagccagccaattaaggtagaagtc
tatgcgccacctagaatcgatcctagtgatattttccttgtaccaggggcttcttacatg
cttactgtgaggggaggcccaaaaactagtgcatacattgagtttgtcagtatggataat
gaggtcgcaaaggtccacacagccacaggactagtttctgcaacatcacctggaaacacc
accatagttaccaagatgtacaggaatggaaatatctttatttgtcaggcatatggtgaa
gttaaagtaggtgttccttcttcagcaatgttaaatgttcaaagcgagcagctagctgtt
ggccgtcaaataccaataattccctccctgtccgaggggaatttattttcattttatgaa
ctttgcagaaattataagtggattataaatgatgatgaggtgttgagtttccaagcagca
gacagcttacacgttggaaatcatggaatgcacatgtccagggagaaaggcaatggactg
acagggtatgtgggtgacaatgaccttggttttattcaagtattgcatggaagatctgca
gggcagacgaatgttacagtttctttctcctgtgattttgttgcttacaaatctttttca
gagtcaagatcatatactgcatctatttccttgtcagtagtgtctgagcttccacttgct
ctgggatcaccaattacttggattctccctccacattataccacgtctgctcttttgcct
tcagcttctagaactttcagtaaaggggatccaagtataggtaaggttacttattctata
ttaggagactgtagaagaaaggccgaattggaggaagatgatcctatactcattgatggg
agcagaataagaacaaaagagagtggcaatcttgcatgtattcaagcaaaagataggtca
aatggaagagttgaggtggcctcttgtgtgaaggttgctgaagtgactcaaatacgtttc
actgcagaaaagttgctggttcacacattagcaattggtgctgaaattgatgttccaatc
aaatattatgacgtgcttggaaatcctttccttgaggctcaagatgttattccgtttgga
gttgaaactaactaccatgatgtcatctctgtcgaggatgcagttgatggcactggaaat
gtccatctcaaagcaatcagttatggtagagctcttgtgcgagtaggttttgccaatgaa
ccaaagaaatctgattatgtggtgattcttgttggtgctcatttgcatcctcagaatcca
actcttcacctaggaagtggtcttaacttcagcatagaaggtctaagtgatcaagtatct
ggtcagtggtttactagtaatgcaagcattgtgtctgtggaccagctatctggacatgcc
aaggcaataggggaaggttctgtacaaattatctttgagtgttcgaatatgaaactgcaa
accacagttacggtgtcacagccagagatgatgtctgttgatgctccaagggaaatcctg
acaaatgtgccgcttcctgcaaatggatatagctttcttgtaaaactcaatgatgcttat
cgccacaagtacaaatctgctaaaaacagggcaagtttcttgtttgattgcctggttgat
ccaccttatgttggttatgtgaagccgtgggttgatcttgatactggtaattcatattgc
cttttctttccttactctccagaaagtttggtacttgccactccaaagtcaggaggcatt
aaacaggatttagctgttactattaaggcatcactcatcggagagcagaatatctcagga
tctgcatcagcactttttgttggaggtttcatcattccgggaacagaaggagattcattg
cagttaaatctaaccccacaatttaacaggagtgtcctcactgttgtaggaaacacagat
gtgagtatctactggcatgatcgggaacggctagctgtcagacccatacatggagaagat
tctcaaggaagaagccgtgcacagtatgagatcaaaattcgcagagcagaaaagtttaaa
gacaaactgatttttacactcccagcaactggtcagatcatggaagttaatgttaactat
gaacctgaagagagaagagcaacaactgcgaaccttaatctatgggctactgcagctgct
tgtttcatcttgcttattgtcacagccactgtattcatttcttacttggatcaacctgtg
agatcccgaccatctgctcctcctggcacgccgagtgtagctgcacctgtaactcctgag
cgaagcagtcctgctggagtaagcgaacattcccctcggacacctcaacctttcttggat
tatgttaggaggacaattgatgaaactccatactacagacaagactttaggaggagggct
aaccctcagaacacttactag
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integrated database retrieval system
