Sturnus vulgaris (common starling): 106850643
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Entry
106850643 CDS
T08833
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04514
Cell adhesion molecules
svg04520
Adherens junction
svg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106850643 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106850643 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
106850643 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svg01009
]
106850643 (PTPRF)
Enzymes [BR:
svg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
106850643 (PTPRF)
Protein phosphatases and associated proteins [BR:
svg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
106850643 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
106850643
NCBI-ProteinID:
XP_014727615
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLEGQ
FQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTVEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSVDHETV
IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPP
KEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEE
FEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQD
LVNITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKNFRVNAV
MKTSVLLSWEVPDSYKSTVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSS
AGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVPADQST
STLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKN
YKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMG
PVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGM
RDHPPIPLTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIA
YDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATI
VMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLQDTVELATYTVRTFALCKNGSNEKTEL
RQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCSAGVGRTGCFIVIDAMLE
RMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQK
LTQVPPGESVTSMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPI
RGVEGSDYINASFIDGYRHQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGR
EKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQ
GVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVD
MFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaaccg
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgtgtgcatcgagatgaa
gcgatctatgagtgcacagccaccaacagcgtgggggagataaacaccagtgccaagtta
acagtgttggaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtgggaaccct
gatcctgaaatctcctggttcaaggacttcctgcccgtggacactgcaaccagcaatggg
agaatcaagcaactccgctcgggagctctgcaaatagagaacagtgaggagtcagaccaa
ggcaaatatgaatgtgttgcaaccaacagtgcaggaacccgctactctgccccagccaac
ctttatgttcgagtgcggcgtgttgctcctcgattctctatccctccgagcaaccacgag
gtgatgcctggggggagcgtgaacctcacgtgcgtggcagtaggtgctccaatgccctac
gtgaagtggatggctggtgtggaggaactgaccaaagaagatgagatgcctgtcggtaga
aatgtcctggagctgaataacatcatgcagtctgccaactacacctgcgtggccatctct
tcccttggcatgatcgaagccacagcccagatcactgtcaaagcactgccaaaacctcca
acagagccattagtgactgaaacaacagctaccagcgtgaccctcacctgggattcaggc
aactctgaccccatttcatattacgtcatccagtacaagcccaaatccctggagggccag
ttccaggaggtggatggtgtggcaacaacccgctatagcataggtgggctcagccccttc
tcagagtatgagttccgggtcattgcagtcaacaacatcggcaggggtccccccagtgaa
ctggtcgaggcccggacaggagagcaagctccttcaagtccacccctcaaagtccaggca
cggatgctgagtgccagcaccatgctggtgcagtgggagcagccagaggagcccaacgga
cagatccgagggtaccgcgtgtactacaccaccgacccgcacctgcctctgagcatgtgg
cagaaacacaacactgatgacagccacctcaccaccgtgggcagcctcatcacaggcacc
acctacagcatccgcgtcctggccttcacttcagtaggggatggacccccctcagacatc
atccaggtcaaaacacagcaaggggttcctgcccagccagctgatttccaggcagaagca
gagtccgatacccgcatcctgttgacatggctgcccgcctctcaggaacgcattactaaa
tatgagctgctgtactgggaaggggaggatggcactcagcaaaaggtggagtttgaccca
acctcctcatatgctgtggaaggtctcaaaccagacacgttgtataaattccgtctgggt
gcccgctcggagctgggggtaggagtttacacccccacggtggaggccagaactgcccaa
tccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccaccaccatc
cgggtaagttgggtgccaccgcccgcccagagccgcaatggggtcatcacccagtactcc
attgcctaccaggcagtggaaggagatgacaacaccaagcatgtggtggatggcattgga
cgggagcattccagctgggagatcaaggacctggagaaatggaccgaatacaaggtgtgg
gtaagggctcacaccgatgtggggccaggaccggagagcatccccgtgcacgtgcgcact
gacgaggatgtgcccagtgccccaccgcgaaaggtggaggtggagtctgtgaattcgact
gccatccgagtgagctggaagctgcccatctccaacaagcagcatgggcagatccgcggg
tatcaggttacttatgtgaagctggaaaacaacgagccccgagggcagccagtgatcaag
gacgtcatgctgtcagaagcacagtggagagctgaggactccgtcgaccatgagacagtc
attggaggcctgctgccagaaaccacctactccgtcacggttgctgcctacaccaccaaa
ggagatggtgcccgcagcaagcccaaagtcatcaccaccacaggggcagtcccggggaag
cccaccatgatgattagcacgacagccatgaacacagccctcatccagtggcacccaccc
aaggagatggtaggggagctgctgggttaccggctgcagtacagacgtctggatgaggaa
aaaatgaacacgatagacttcgggaagagagaccatcactacacagtgactaacctgcac
aagggggccacgtacctcttcaaattgtctgccaagaacagagctggcccaggagaggag
tttgagaaggagatcacaactgctgaagatgtgccaagcggcttcccacagaacctgcgt
gtggtgggtctcaccacttccaccacagaagttgcttgggaccccccggtcttggcagaa
aggaatggcaagattgtcaactacacagtggtatacagagacataaatagccagcaggac
ctggttaacatcaccaaggacacgagtatcactttgacaaatttgaaacctgataccact
tacgacatcaaagtgagggcccgcaccaataagggggctgggccactcagccccagcatc
cagtcacggaccatgccagtagagcaagtgtttgctaagaacttccgtgtcaatgccgtc
atgaaaacgtctgtgttgctgagctgggaagtgcctgactcctataaatctacagtgcct
tttaagattctgtacaatagccagagtgtggaggtggacggccactcgatgaagaaactc
ataagtgacctccagccagacacggactattcttttgtgctaatgaaccgtgggagcagt
gcaggggggctccagcacctcgtctcaatccgcactgctcctgatgtcctgcaaagcaaa
cccatcgccacaaacaagtacatacaggaaggaaaattcacactgactcttcccaaagtg
cagaccactgtgccagttcggtggtattacatcgtggttgtgccagcagaccagagcacc
agcaccctgactgctcggtggcggacacctgatgagatggagctggaccagctgctggag
gccataagccaagggagtcagagcagacggcagcgacgccaggcagacagactcaagccc
tacattgctgctcaagtggatgtgctgcctgagacctttaccctgggggatgagaagaac
tacaaaggtttctacaacaagcctctgtctcaagacctgagctatcgctgcttcgtgctg
gcctcgctggaggatggagacacgaagagatatgcagccagcccctactcggatgagatc
gtgatggaagtggcatcagcaaagcagcaggatgaaccagagatgctctgggtgatggga
cccgtcctggctgtgatattaatcatcatcattgtcattgccatacttctcttcaaaagg
aaaagggcacattccccctcttccaaggatgagcactccatcggcctgaaggattcactc
ttggcccactcgtctgacccagttgagatgaggaggctcaactaccagactccaggcatg
cgtgaccacccccccatccctctgaccgacctcgctgacaacatcgaccggctcaaagcc
aacgatgggctgaagttctcccaggagtatgagtccattgatcctgggcagcagttcacc
tgggagaactccaacctggaagtgaataaaccgaaaaaccgctatgcaaatgtgatagcc
tatgaccactcacgtgtcatcctgacttccattgatggggtcccaggcagtgattacatc
aatgccaattacattgatgggtatcggaagcagaatgcctacatcgccacacagggaccg
ctgccagaaaccctcagcgacttctggaggatggtgtgggagcagagaacagcaactata
gtcatgatgactaggctggaagagaagtccagggtaaagtgtgaccagtactggccgagc
cggggtacggagacctatgggatgatccaggtgaccctgcaggatacagtcgagctggcg
acctacaccgtccgcaccttcgcgctgtgcaagaatggctccaatgagaagacagagctc
cgacagttccagttcatggcttggcctgatcacggagtcccagaataccccaccccaatc
cttgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatggttgtg
cattgcagtgctggcgtgggccgaaccggctgtttcattgtcatcgatgccatgctggag
cggatgaagcacgagaagaccgtggacatctacggccacgtgacatgcatgcgctcccag
cgcaactacatggtgcagacagaagaccagtacatcttcatccatgaggccttgctggag
gccgccacctgtggcaataccgaggtgcctgcacgcaacctcttcgcccacatccagaaa
ctgacccaggtgccaccaggcgagagcgttacttcaatggagctggaattcaagctgctg
gccaattctaaagcacatacctcacgtttcatcagtgccaacctcccctgcaacaaattc
aagaaccgcctcgtgaacatcatgccgtatgagctgacgagagtctgcctgcagcccatc
cggggcgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcatcag
aaggcctacatcgccacacagggaccactggccgagaccacagaggatttctggcggatg
ctctgggagcacaactccaccattgtggtgatgttgacaaagctgcgtgagatgggccgg
gagaagtgccatcagtactggcctgcagagcgttctgcccggtaccaatacttcgtggtg
gaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacggat
gccagggacggccagtcacggaccatccgccagttccagttcacagactggcctgagcag
ggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcataagaccaag
gagcagttcgggcaggatgggcccatcacagtgcactgcagtgctggggttgggcgcact
ggcgtgttcatcacactcagcattgtgctggagaggatgcgctatgagggcgtggtggac
atgttccagatggtgaagaccttgcggacgcagcggccggccatggtgcagacagaggac
cagtaccagctgtgctacagagccgcattggagtaccttggcagctttgaccactatgca
acgtaa
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integrated database retrieval system
