Sturnus vulgaris (common starling): 106852006
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Entry
106852006 CDS
T08833
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg00310
Lysine degradation
svg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106852006 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svg03000
]
106852006 (PRDM6)
03036 Chromosome and associated proteins [BR:
svg03036
]
106852006 (PRDM6)
Enzymes [BR:
svg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
106852006 (PRDM6)
Transcription factors [BR:
svg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106852006 (PRDM6)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106852006 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
106852006
NCBI-ProteinID:
XP_014729889
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGPLAQLQPPERAEPSADNLRQRPT
SLSSASSSSSSSTPSSSSTSSCVAAAAASLAGLTSLPVTQLPVFGPLQSSELPAGGAPAP
LQGKDLCGAGSGGGKCGDRGAPRYRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPDIPEWLRDLPREVCLCTSTVPGLAYGI
CAAQRIQQGTWIGPFQGILLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSW
MRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQD
ENLNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESG
FNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQ
CGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERC
ERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggggaccccggcggatccgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagcttttcccgcagagcagccaactcaaaagcagcgggcccctcgcc
caactccagccgcccgagagagccgagccctcggctgacaatctccgccaacgcccgacc
tccctctcctccgcctcctcctcctcttcctcgtccactccgtcttcctcctccacctcg
tcctgcgtcgctgcggcggcggcttctctggctggtctgacctccctgcctgtgacccag
ctcccggtcttcggaccgctgcagagctcggagctcccggccggcggagcgcccgctccc
ctgcagggcaaggatttgtgcggggccggcagcggcggcggcaaatgtggcgaccgtggt
gcccctcggtaccgctgcacagccgaggagctggactactacctgtacgggcagcagcgc
atggagatcatccccctgaaccagcacaccagcgaccccaacaaccgatgtgacatgtgt
gctgataaccgcaatggcgagtgccccatgcacgggccgctgcactccctgcgccggctg
gtgggcaccagcagcgcggccgcggcagccccgccgcccgacatccccgagtggctccgg
gacctgccccgggaagtgtgcctgtgcaccagcaccgtgcctggcctggcctacggcatc
tgtgcggcacaacggatccagcagggcacctggattgggcccttccagggaatcttgctc
ttgccagagaaggttcaagcaggagccatcaggaacactcagcatctctgggaaatatat
gaccaggatgggacactgcagcactttatcgatggtggagagcccagtaagtcaagctgg
atgaggtacatccgatgcgccaggcactgtggggagcagaacctaacggtggttcagtac
aggtcgaatatattctaccgggcttgtatagatatccccaggggcactgagctgttagtg
tggtacaatgacagctacacatctttctttggaatccctctccagtgcattgcacaagat
gaaaatttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacag
ccatttaataaaagtagcaaactatcccctgccactccacagcgatccgtagtatttcca
cagactccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcagga
tttaaccagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaa
ctaaattctgagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttc
acccagcggatcctcttacagatgcatgtgtgtacgcagaaccccgacaggccctaccag
tgtggccactgctcccagtccttctcccagccgtcggagctgaggaaccatgtggtcacg
cactccagcgacaggcccttcaagtgtggctactgcgggcgcgccttcgccggggccacg
acactcaacaaccacatccggacacacacgggggaaaagcccttcaagtgcgagaggtgt
gagaggagcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgc
aagccaataacagagagcacagaatcaattgaagtggattaa
DBGET
integrated database retrieval system
