Sturnus vulgaris (common starling): 106853325
Help
Entry
106853325 CDS
T08833
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106853325 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106853325 (SMG6)
03032 DNA replication proteins [BR:
svg03032
]
106853325 (SMG6)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106853325 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
106853325 (SMG6)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106853325 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
UPF0561
Motif
Other DBs
NCBI-GeneID:
106853325
NCBI-ProteinID:
XP_014731968
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MAEGLERVRVSAAELRDMVAAQARAAGGGRENMKEVKEPRHRKDNRRPDQEIYKPGLSRL
RSKLVSPKQEALEKERSRAEEDKEESAGDKDFVEAPAVEDLDKSNGPKQNGPSQEKEETE
TKGGLQSQENSSKQPIVDEWCPKTPRRTKKPDQQIYQPGKRLHSAAKEPSLRSASEEITG
RMEQLKVEGDEETEKGTGKDSNRKIKSSKEDREGSQAGEAVKASRGDKGRRAERSDRVRR
TGDEVLPGKLGSTKRYSRTDKRRSRYRTCSTSSAGSNNSTDGALLVDGVERRQERARERI
RPRKQLSVSSTDSLDDDRIDEAEVYVSSRNSDRRRHSEQSRASRSESEWSSNGREVKGPF
RVTFDSRTMNRDISLADTDKKKSLKALEVSEARSQSREPQGRGRGILFLPANTDLSASSV
GVPEATHPGPRLLLGGAGSKGPRSRGRGGTARRLWDPNNPDQKPALKSQTAQLHFLDTDD
EVSPTSWGEARQAQSSYYKFQNSDNPYYYPRASGQSPQYPYGGYSLQYPMGPTNGVYPGA
YYPGYPGQAGQYLCGPLPPAPLSPEVEQQMRNIQQQELSKLLREAGNQEQQLSNLLSRDR
ISPEGLEKMAQLRVEMLQLYERCILMDIEFSDTQNVDQLLWKNAFYQVIEKFRQLLKDPQ
GENAQEIRNKLLLLLDEGSSFFDSLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALI
SAQRCMICQGDICRYREQANDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAIYTRRKL
DAVYYYMRSLAASNPILTAKESLMSLFEETKRKSEQMEQRKHQVLDVSPNRRGKGKKSTL
RQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDNGLGNLSPSDLNKRFILSFLHAHGKL
FTRIGMETFPAVAEEVLREFQVLLQHSPPPIGSTRMLQLVAINMFAVYNSQPKECISEDC
RSVIQEQATALGLSMFALLVRRCTNLLRECVPVQPQEMEQEDEEDDIKVSALPQDLKELL
PSVKVWSDWMLGHPDTWNPPPTALELPKQVSVDVWATLADFCNILTTVNQSEVPLYKDPD
DDLALLSLEEDRLLSGFVPLLVAPQEPCYVERTSDKVIAADCKRVTVLKYFLEALCGQEE
PLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQEDDVRIEAFEDDSETEGSGGEMDIK
ELRAKKQALARKVAEQQRRQDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLGSLV
TLLDCRKFILVVPLIVINELDGLAKGPEMEHRAAGYARQVQERARKSIEFLEERFESRDN
CLRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPSNKDDPIRLL
REVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggctggagcgcgtccgcgtctcggccgccgagctgcgggacatggtggcg
gcgcaggcccgcgcggccggcggcgggcgagaaaacatgaaggaggtgaaggagccgagg
catcgcaaagacaacaggcgccccgaccaggagatttacaagcctggcctctccagactg
aggagcaaacttgtgtcaccaaagcaagaggccttggagaaggaaaggagcagagctgag
gaggataaggaggagagtgctggggacaaggactttgtggaagccccagctgtggaggac
ttggacaaaagcaatggccccaagcagaacggtccttcacaggaaaaggaagaaacagag
accaaaggtggcctgcaaagccaggaaaactcatccaagcagcccattgtggatgagtgg
tgtccaaaaacccccagaagaaccaagaaaccagaccagcagatctaccagcctgggaaa
cgcctgcactcagctgctaaagaaccctccctgcggtcggccagcgaggaaatcactggg
aggatggagcagctgaaagtggagggagatgaagagactgagaaaggcactggaaaagac
agcaacagaaaaattaagtcaagcaaggaggacagagaggggagccaggcaggggaagca
gtgaaagcctccaggggggataaagggagacgagcagagcgaagtgacagggtgaggagg
acgggggatgaggtgctgcccgggaagctgggctccaccaagcgctattcccgcacggac
aagcggcggagccggtaccgcacctgcagcaccagctcagctgggagcaacaacagcacg
gacggagccctgctcgtggatggggtggagaggaggcaggagcgtgccagggaaaggata
cgtcctaggaagcaactctccgtgtcctccactgactccttggacgacgacaggatcgat
gaggcagaggtgtacgtgtccagcaggaattcggacaggagaaggcattcggagcagagc
cgagcttccaggagtgagagcgaatggagcagcaatggcagggaagtcaagggacccttt
cgagtgacatttgacagcaggaccatgaacagggacatcagcctggcagatacagataaa
aaaaagtccctgaaagccttagaggtttcagaggcaaggagccagagcagggagccccaa
gggaggggccgtgggattctcttcctgcctgccaacacggacctctctgccagctcagtg
ggtgtccctgaagccactcaccccgggcccaggctcctgctgggtggggctggcagcaaa
ggcccccggagccggggccgaggtggcactgcccgccggctgtgggacccaaacaacccg
gaccaaaaacctgccctgaagagccagactgctcagcttcacttcctagacacggatgat
gaagtgagccccacctcctggggggaagcccgccaggcccagtcctcctactataaattc
cagaactctgacaacccctattattaccctcgtgcctccgggcaaagcccccagtatccc
tacggtggatattccctgcagtatcctatgggtccaaccaacggtgtgtacccaggagcc
tattaccccgggtaccctggccaggcagggcagtacctgtgtggcccactcccccctgct
cctctgagtcccgaggtggagcagcagatgaggaacatacagcagcaggagctcagcaaa
ctcctgcgtgaggctgggaaccaggagcagcagctcagcaacctcctgtccagagaccgc
atcagcccggaggggctggagaagatggctcagctgagggtggagatgctgcagctctat
gaacggtgcatcctgatggatatcgagttctctgacacccagaacgtggaccagttgctg
tggaaaaacgctttttaccaagtgattgagaaattccggcagctcctcaaggaccctcag
ggggaaaatgcccaagaaattcggaacaaactgctcttgcttctagatgagggctcttct
ttttttgacagcctcctccagaagcttcaggtgtcctaccagttcaagctcgaggactac
atggatgggatggccatccgcagtaaacctctcaggaaaatggtgaagtacgccctgatc
agtgcccagaggtgcatgatctgccagggggacatttgccggtacagggagcaggcgaac
gacacggcgaactacggcaaggcccgcagctggtacctgaaggctcagcaaattgctccc
aaaaacggccgcccgtacaaccagctggcacttctggccatctacacgaggaggaagctg
gatgctgtgtactactacatgcgcagcctggctgccagcaaccccatcctcacagccaag
gagagcctcatgagtctgtttgaggagacaaaacgcaagtccgagcagatggagcagagg
aaacatcaggtgctggatgtgagccccaaccgccggggcaaaggcaagaaatccaccctg
agacaagtgggtgatgatgccaccaggctggagatctggatccatccctcccacccccgc
tcctcccagggccacgagtctggccgggattccgagcaggacaacgggcttgggaacctc
agccccagcgacctgaacaaaaggttcatcctcagttttctccatgcccatgggaagctg
tttaccaggattgggatggagactttccctgcggtggccgaggaggtcctgagggagttc
caggtgctgctgcagcacagcccccctcccatcggaagcacccgcatgctccagctcgtg
gccatcaacatgtttgcagtgtacaactcccagcccaaagagtgcatctctgaggattgc
cgctccgtcatccaggaacaggccacggccctggggctctccatgtttgcactcctggtg
aggaggtgcaccaacctgctgagggaatgtgtgccagttcagccacaagagatggagcag
gaggatgaggaggacgacatcaaggtctctgccttgccccaggacctgaaggagctgctc
cccagtgtgaaggtctggtcggactggatgcttggccacccggacacctggaatcctcct
ccaacagctcttgaactccccaaacaggtctcagtagatgtgtgggcgacgctggctgac
ttctgtaacatactgaccacagtgaatcagtcggaggtgcccttgtacaaggacccagat
gacgaccttgccctgcttagcctggaagaggatcggctgctctcgggcttcgttcccctg
ctggtcgccccccaggagccctgctacgtggagaggacctcggacaaggttattgcagcc
gactgcaagagggtcacagttctgaagtatttcctggaagccctttgtggacaagaagag
cctttgctggcattcaagggtggaaaatatgtgtcagtggcacccgtcccagacgccatg
ggaaaggaaatgggaagccaagagggaaaacaactggaagatcaggaggatgatgtgagg
attgaggcctttgaagatgattctgagactgaaggcagtggaggagagatggacatcaag
gagctcagagccaaaaagcaagcactggccaggaaagtcgctgagcagcagcgccgtcag
gacaagattcaggctgtgctgaaagaccagagccaaatgaggcagatggagctggagatc
agacctgtctttctggtcccagacaccaatggtttcattgaccacctgggcagtttggtc
acgctgctggactgcaggaagttcatcctggtggtgcccctgatcgtgataaacgagctg
gatggcctggccaagggcccagagatggagcaccgggctgcaggctatgcccgccaagtg
caggagagagccaggaagtccatcgagttcctggaggagcgattcgagagccgggacaac
tgtttgagggctctgacaagccgaggcaatgagctggagtccatctccttccgcagtgaa
gacaccactggccagcagggaaacaatgatgacctgattctgtcctgctgcctccactat
tgcaatgacaaggccaaggatttcatgccctccaacaaagacgatcccatccgtttgctc
agggaagtggttttgctgacggacgaccggaacctgcgagtcaaagctctgacccgcaac
gtgccggtgcgggacatccccaccttcctcaagtgggctcaggagggctga
DBGET
integrated database retrieval system