Sturnus vulgaris (common starling): 106858239
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Entry
106858239 CDS
T08833
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svg04040
]
106858239 (SCN4A)
Ion channels [BR:
svg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106858239 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
106858239
NCBI-ProteinID:
XP_014740273
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRVKRQHVEMPEEEEVKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLEDLGQDNDTLVN
STFYEFMDDFTGNFTGNFTGNFTSNSTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFV
VVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RASSSDSLPSSVAGKGQDSDINSDQDKAKDCNGQVVPKITLQRSNTVIDFNPTYEPEKPD
VNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWV
MLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEM
VLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMH
DFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSF
SADSLAASDDDGEMNNLQIAIGRISRGIAFAKATLLALLRRLCKGKKVAPEEEQDPSKRD
NSVLNHMDTALEPKSGYLDGITDKEHIFMDELDHMNFINNPNLTVQVPIASEESDLYEET
STQSDTEDTTKNPLSSDNASSVCSTADYKPPAPEEEEMAEVAEESNEPEECFTEGCVKRF
PCLYVDINSEKGRIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIR
TILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSEL
GAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYRCVNTTTGELFDISVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVAT
FKGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQK
KKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGKVFDFVTKQVFDITIMIL
ICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRQYFFTVGWNIFDFV
VVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLL
NPILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFS
VATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLI
TMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTL
KRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGN
TGTDVETAPALGLEPIPSSEMPPDAPEEAQAWDKERVVKESLV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgaaaacctgcgccccttcacgccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccgggtaaagcggcagcac
gtggagatgcccgaggaagaggaggtcaagcccagcagcgacctggaagccggcaagaac
ctgcccctaatctatggtgacccacccctggagctgatcgggacccccctggaggacctg
gaccctttctataaggacaagaagacgttcatagtcctcaacaagggcaagtccatcttc
cgcttctcggccacccctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcacaattttaacc
aactgtgtgtttatgacgctgagcaaccccccggcgtggtccaagaatgtggaatatgcc
ttcactggcatctacaccttcgagtctctcatcaagatcctgtcgagaggcttctgcatc
gacgacttcacattcctgcgtgacccctggaactggctggacttcatggtcatctccatg
gcctacatcaccgagttcgtggacctggggaacatctctgccctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacggtgataccagggctgaagaccatcgtgggggctctg
atccagtcggtgaagaagctctcagatgtgatgatcctcacggttttctgcctgagcgtc
ttcgccctcatcggcctccagctcttcatgggcaacctccggcagaaatgtgtgcgctgg
cctccccccaacagcaccttcctggaggatttggggcaggacaacgacaccttggtcaac
tcaaccttctatgagttcatggatgacttcacagggaacttcaccgggaatttcactggg
aacttcaccagcaacagcacctttgacttcgaggcctacatcagtgatgaagccaattac
tacttcctggagggagccttggatgccctgctctgtgggaacagcagtgatgctgggaag
tgccctgagggctacgagtgcatgaaggccgggaggaaccccaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggacttctgg
gagaacctcttccagctgaccctgcgggcagcagggaaaacctacatgatcttcttcgtg
gtggtgatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcctacgctgagcagaatgatgccaccatgctggaggagcagcagaaggaggaggaattc
cagcagctcatggagcagctgaagaagcagcaagaggagcaggaaaggctgttgcaggag
cgagcatccagcagcgattccctgcccagcagcgtggccgggaagggacaagactcggac
atcaacagtgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagagatccaacaccgtgattgatttcaatcccacctatgagccagagaagccagac
gtcaaccacctcactgtgggcaaccaagacgggccagggctggagaagagggtgggaagt
gccatcagtgtcatctccaacgctgtggaagagctggaagaagctcaccaaaaatgccca
ccctggtggtacaaattcgcccacacattcctggtctggaattgctgccgtccgtgggtg
atgctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctgggcatcacc
atctgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaggag
ttcgagaacgtgctgagcgtggggaacctggtcttcacagggatcttcacggcagagatg
gtcctgaagctcattgctctggatccctacgagtatttccagcagggctggaacatcttc
gacagcttcatcgtcactctgagcctggtagagctgggcttggccaacgtgcaggggctc
tctgtgctccgctccttccgtctgctgagggttttcaagctggccaagtcctggcccacc
ctaaacatgctcatcaagatcatcggcaactccgtgggagccctgggcaacctcacgctg
gttctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttcggcaagagc
tacatggagtgcgtgtgcaagatctccttggactgcaccctgccccgctggcacatgcac
gacttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagacc
atgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtc
atggtcatcgggaacctcgtggtgctaaacctgttcctggctctgctgctgagctccttc
agtgctgacagcctggcggcatcggacgacgatggggagatgaacaacctgcagatcgcc
atcggccgcatcagccgcggcatcgccttcgccaaggccacgctcctggcgctgctccgc
cgcctctgcaagggcaagaaggtggcaccagaggaggagcaggaccccagtaaaagggac
aactctgtgctcaaccacatggacacggctctggagcccaagtcagggtacctggatggc
attacggacaaggagcacattttcatggatgagctggaccacatgaatttcatcaacaac
cccaacctgacggtgcaggtccccatcgcctccgaggaatccgacctctacgaggagacc
agcacccagtctgacaccgaggacaccaccaagaaccccctgtccagtgacaacgcctcg
tccgtgtgcagcacagcggattacaaaccccccgcgcccgaggaggaggagatggcagaa
gtggctgaggagagcaacgagcccgaggagtgtttcactgaaggctgtgtgaagaggttc
ccctgcctctacgtggacatcaacagtgagaaggggaggatttggtggaacctcaggaaa
acctgcttccgcatcgtggagcatgactggttcgagaccttcatcgtcttcatgatcctc
ctcagcagtggggcgctggctttcgaggacatctacatcgagcagcgcaaggtgatccgc
actatcctggaatacgcagacaaggtcttctcctacatctttgtcatcgagatgctgctc
aagtgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctggatttc
ctcatcgtggatgtgtccctggtcagcctgacagcaaactggctgggatactccgagctg
ggagccatcaaatccctgcggacactgagggctctgcgacctctgcgtgctctgtcccgg
tttgagggcatgagggtggtggtgaatgccctggtgggtgccatcccctccatcatgaac
gtcctgctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctgttt
gcagggaagtactacaggtgtgtcaacaccaccacaggtgagctcttcgacatcagcgtg
gtcaacaacaagagcgactgcatggccctgctctacaccaatgaggtcagatgggtcaat
gtcaaggtcaacttcgacaacgtgggcttgggttacctgtccctgctgcaggtggcaacc
ttcaaaggctggatggacatcatgtatgcagccgtggactcacgtgagattgaagagcag
ccacagtacgagatcaacctctacatgtacatctactttgtcatcttcatcatcttcggt
gccttcttcactctgaacctctttattggtgtcatcattgacaactttaaccagcagaag
aaaaagtttggaggcaaagatatcttcatgacagaagagcagaagaaatactacaatgcc
atgaagaagctgggctccaagaaaccccagaagcccatccctaggccagcgaacaaattc
caagggaaggtgtttgactttgttaccaagcaagtgtttgacatcaccatcatgatcctg
atttgcctgaacatggtgaccatgatggtggaaacagatgaccagagcgagctcaaaacc
tctgtcctctacaagataaacctggtcttcatcgtcatcttcactggggagtgcgtgctc
aagatgttcgccctgcgtcagtacttcttcactgtgggctggaacatcttcgactttgtg
gtggtcatcctctccatcctaggtatcgtcctctcagacatcattgagaagtattttgta
tcccccaccctcttcagggtgatccggctggcgaggattggccgtgtgctccggctgatc
cgaggagccaaaggcatccggacgctcctctttgccctgatgatgtccctgcctgccttg
ttcaacatcggcctcctgctcttcctcgtcatgttcatctactccatctttgggatgtcc
aattttgcctatgtcaagaaggagtcggggatcgatgacatcttcaactttgaaactttt
gggaacagcatcatctgcctcttccagatcaccacatcagcgggctgggatgggctcctc
aaccccatcctcaacagcggccccccagactgtgaccccgagctggagaacccagggagt
tcagtgaaaggagattgtgggaaccctgccattggcatcttcttcttctgcagctacatc
atcatctccttcctcatcgtggtgaacatgtacatcgccatcatcctggagaacttcagc
gtggccacagaggagagcagtgagcccctctgcgaagatgattttgaaatgttttatgaa
acttgggagaagtttgacccagatgccactcaattcattgcctacagcacattgtcggac
tttgtggacaccttgcaggagccactcagagttcccaaacccaacaagatcaaactcatc
accatggatctaccaatggttgctggggacaaaatccactgcctagacatcctctttgcc
ctgactaaagaagtgctgggagactcgggagagatggatgccctgaaggccaccatggag
gagaagttcatggctgccaacccctcaaaagtttcctatgaacccatcaccaccaccctg
aagaggaagcacgaggaggtttgtgctaccaagatccagagggctttccggcggtacctg
ctgaggcgctcggtgaagcaggcgtcctacatgtacaggcacagccaggatgccttgggc
gaggatgcgcctgagaaggaagggctgatcgccaccaaaatgcaggagatctatgggaac
actgggacagatgtggagacagcccctgccttgggcctcgagcccattcccagctcagag
atgcccccggatgctcctgaggaagcacaggcttgggataaggaacgcgtggtcaaagag
tcgctggtgtaa
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integrated database retrieval system
