Sturnus vulgaris (common starling): 106858689
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Entry
106858689 CDS
T08833
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
svg03460
Fanconi anemia pathway
svg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106858689 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
106858689 (BRCA1)
03460 Fanconi anemia pathway
106858689 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svg01009
]
106858689 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106858689 (BRCA1)
03036 Chromosome and associated proteins [BR:
svg03036
]
106858689 (BRCA1)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106858689 (BRCA1)
Enzymes [BR:
svg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106858689 (BRCA1)
Protein phosphatases and associated proteins [BR:
svg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106858689 (BRCA1)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106858689 (BRCA1)
Multi subunit type E3
BRCC complex
106858689 (BRCA1)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106858689 (BRCA1)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106858689 (BRCA1)
BRCA1-A complex
106858689 (BRCA1)
BRCA1-B complex
106858689 (BRCA1)
BRCA1-C complex
106858689 (BRCA1)
BRCA complex
106858689 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
106858689 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_6
BRCT_3
zf-RING_5
zf-Nse
zf-RING_10
RTT107_BRCT_5
Zf_2nd_IFT121
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
106858689
NCBI-ProteinID:
XP_014740964
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MGRMDFSVITIQQVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLISKKKK
GVVECPLCKTEVTKRSLKENSKFKQLIEGLLETIHAFELDTGVKFIKSHHFPQTSTEGTA
AESLCKESSVIQSKGFRNRRKSAKGSEQENFTLQEASVNIQLSDAKMCHPRNKPQKSDSQ
KGTYIEFGSESSEEFFKQASKTGFEDKGAVQVSSRVRLEELESAEKGNENSCNAQPDKLC
PKEITLPNVTGESDFSKECLSKKSTRSSAERAKPDQVNVTECQSSPLNVLAVDLLPEQCD
RMGGASPTGNGDTSFFKSTEEMDEQQTQHHSENQGFDLEDSSENRLNKSKEMDTDVQSVE
AVEAYEPENDSLHDKELPLQNLPQPETLHSATPNKVSKKRLKQSIQKVNEWFSKSNEILS
SGSSLDESAASANVSGEGDLCLSDKESCISEKTDPMADSMEIAAVEGKKRRSEQTAESIK
DKIFGRTYKRGRKSNPPSTLRAILPTGRKEDVAADKCLKNFSKDRLKRKRKSACALQPED
FIKKKDTEEADGGPQSVDRGLGDAGKKRCGKSVAVNESHLSQNRANDTLTEPEEGGESTG
KKATEKVTTMHCDGEPEMYNCDQKSTKKRGSAAKRCRHSSRTMCSLELVVDRGSVFPDPA
EPQIDSYPSSGEPRKADSEQNAVRRSRRLQILSEEMTKETKTEIKGARKNNSDRGRSVSG
DQRNVAAHSAEYKDLCEPQDELSYRPVTNLEGGDLEANEMQVSLKNLPDTAETKKNQFNP
SRLPSNCGSTVPDTSSLDSEILGSPLLLQPPSVSAGQTASQQTEKVSESPAAFPQECGHD
SQNVPGDFKTEKLPMAKNVLELTKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTPRQARAV
EDPPSETLNLSCAAQVENKASKQLQPESLQEEKTAAQNLSRVSEKEKLKTCESAHIDPVP
CFAVSTGEHRGDISQAAEEGTLIPARTGTAQAEHKNGLLQEEEDNEKPVSNEIGMESELR
QNPIESDGSQSDQSNTEKHDSTQNDLNSVPEISFSSESNQAGKTGVADCKGPILHFQSTS
MICPAACQQSPDEFSCEVIGTKSSKRERKHVEEDEEQAAQTVSTAMPQCSAAEALEEPLR
ENRDLTGLSETPDGLLCSDTDIEDTSLCETDRKEQSAVFVKSDNVLGKELHNRNASSGPG
SRGIQKSRRRVQKLPSSDEESCEDEDLPCFQTFIFSKSVSTPFQTDKQMTSLVESPVVEC
PVSPSVLPHSVSNDDDLVQKVPEAALSNVCVSPSQESECSVNLFSSQSNMSEESPNGAQE
LKKHLSQVHDCKQMSSVNDSKETSQNCSVGLKTTKDECQEDPDLGANPGEASGSDSEISI
VEDSCGPFSQGEILTTQQKNAMQNSLKKLQQEMAALEAVLKQNGSQNCEVLPVHRELPPS
STGGAFEKEQTRKEKNRSPELLFPSSKSSLTKRSDLEKGPECDSVLKNKTSSEKTKPVQE
AVQEHRQCQLEAENAEEQQSGTRQNTASVSSDLFGNVTQSPDHSSSSLSSFIPQTAEATG
GPVMAQNTDKSCGPGHKSKRSEPVPVVHNATGKQNATSPVVTKRKVMSIVASGLNHSEHL
VVQKFVKKTQSTLSNHITEGTTHVIMKTDEELVCERTLKYFLGIAGGKWVVSYQWIIQSF
KEGRILDEEPFEVRGDVINGRNHQGPKRARQALTEKIFKDFEICCCGPFTDMTTEHLEWM
VELCGASVVKQPDLLSHTANSTAVVVVQPDAWKENVDYRAIQQQSSVAVVTREWVLDSVA
CYQCQELSAYLVS
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatggacttctcagtgataactattcaacaagtacaaaatgtgctttcggct
atgcagaagaacttggagtgccctatatgcttggatgtggtacaagagcccgtttcaaca
aaatgtgatcacatattctgcaggttctgcatgttcaaacttatcagcaaaaagaaaaaa
ggtgtggtggaatgtcctctgtgcaagactgaagttaccaagagaagtctgaaagaaaat
tccaaatttaagcaactaattgaaggattgttggaaactatccatgcttttgagcttgac
actggagtgaagtttataaagagtcatcactttcctcaaacatccacggagggcactgct
gctgagtccctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaga
aaaagtgctaaaggcagtgaacaagaaaacttcactttgcaggaagctagtgtgaatatt
cagctttcagatgccaaaatgtgtcacccaagaaacaaaccccagaaatctgattctcaa
aagggtacttatatagagtttggctctgaatcatctgaagagttttttaaacaggcaagc
aaaactgggtttgaagacaaaggagcagttcaggtttcttctcgagtaaggctggaagaa
cttgagagtgctgagaaaggaaatgaaaattcttgcaatgcacagcctgacaagttgtgt
cccaaagaaataacactaccaaatgtcacaggtgaaagtgatttctcaaaggaatgcttg
agcaagaaaagcactcggagcagtgctgaacgtgccaaacctgaccaagtgaatgtgact
gaatgccagagttctcctttaaatgttcttgctgtagacctgctcccagagcagtgtgac
agaatgggtggtgccagtcccacagggaatggggacacctcattctttaagagcacagaa
gaaatggatgaacagcaaacccagcaccacagtgaaaaccaggggtttgatttagaagat
agctcagagaacaggctgaataaaagcaaggaaatggatactgatgtgcaaagtgtggaa
gctgtagaggcatatgagcctgagaatgactctcttcatgacaaagaacttcctctgcag
aatctgcctcagccagagacacttcactctgccaccccaaataaagtctccaagaagaga
ctgaagcagagcattcagaaagtcaacgaatggttttcaaaaagcaatgagattttgtct
tccggttcatccctggatgaatctgctgcatcagctaatgtttcaggtgaaggagatctg
tgtttatcagataaagaatcctgtatttcagaaaagactgaccctatggcagattccatg
gaaattgcagcagtggaaggaaaaaagaggcggtcagaacaaacagcagaaagcatcaaa
gacaaaatatttggaagaacatacaagagagggaggaaatcaaatcccccttctaccttg
agagccattttgcctactgggagaaaggaagatgtggctgctgataagtgcctgaagaat
ttcagcaaagacagactcaaaagaaagaggaagtctgcctgtgccctgcaacctgaggat
ttcatcaagaaaaaagatacagaagaggcagatgggggccctcaaagtgttgatagaggc
cttggagatgctggaaagaaaagatgtggtaaaagtgttgctgttaatgagagtcacctc
tctcagaatagagcaaatgatacattaacagaacctgaggaaggaggagagtccacaggg
aagaaagctactgagaaggtcactaccatgcactgtgatggcgaaccagaaatgtataac
tgtgatcagaaaagcaccaaaaaaagaggttctgcagcaaaacgatgcaggcattctagt
agaactatgtgttcactagagttagtagtggatagaggctctgttttccctgatccagct
gagccacagattgacagctatccaagcagtggagagcccaggaaagctgactctgagcaa
aatgcagtcagacgcagcagaaggcttcagatactttctgaagaaatgacaaaagaaaca
aagacagaaataaaaggagcaagaaagaataacagtgatcgtggaaggtctgtgtctgga
gaccaaaggaatgtggcagctcactctgctgaatacaaagacctgtgtgagcctcaagat
gagttgagttacaggcccgtcactaatttggagggaggtgatctggaagcaaatgaaatg
caggttagtctaaagaatttacctgacactgcagaaactaaaaaaaatcagttcaatcct
tcacgtctgccttcaaactgtggttccactgtgcctgatacaagttctctagacagtgaa
atactgggtagccctctcctccttcagcctccttcagtgtctgctgggcaaactgcttct
cagcagactgaaaaggtgtctgaatcacctgctgcttttccccaggagtgtgggcatgat
tcacaaaatgttccaggggacttcaaaactgaaaagttgccaatggctaaaaatgttttg
gaattgactaaggaagctgaagacagtgacttagacactcagtatctgcgaaatatattc
aggcattcaaagcgctcgtccttcagcctttttcagactcccaggcaggcacgtgcagtg
gaagatcctccttctgaaaccttaaatctgtcgtgtgctgctcaggtagaaaataaggct
agcaaacaattacaaccagaaagcttgcaagaggagaaaacagctgctcaaaacttgagc
agggtttccgagaaagagaagcttaagacttgtgagtctgcccatattgatcctgtgcct
tgctttgctgtcagcacaggagaacacaggggtgacatttcacaggctgcagaggaaggg
actctgattccagcaagaacagggactgctcaggctgagcacaagaatggattgctacaa
gaagaggaggacaatgaaaagccagtgtcaaatgagatagggatggaaagtgagttgaga
cagaatcccatcgaaagtgatggaagccagagtgatcagagtaacacagagaagcatgat
tctacacaaaatgatttaaactcagtcccggaaatcagcttcagttcagaaagcaatcag
gcaggcaagactggagttgctgattgcaaaggaccaattctacatttccagtccacatca
atgatttgtcctgcagcttgtcagcaaagccctgatgaattcagctgtgaagtcattggg
acaaaaagtagcaaaagagagagaaaacatgtagaggaggatgaagagcaagcagcccaa
actgttagcactgcaatgccccagtgttcagctgcagaagctctggaagaacctcttaga
gagaatcgtgatcttacaggtttgtctgaaacccctgatggtttactgtgctctgacact
gacattgaggacaccagtttatgtgaaactgataggaaagagcaatctgcagtgtttgta
aaaagtgacaatgtcctgggaaaagaactgcacaatagaaatgcaagttctgggccagga
tctcgaggtattcaaaagtctcgaagacgagtgcagaaactgccatcttcagatgaggag
tcctgtgaggatgaagacttaccatgctttcagacattcatcttcagcaaatcagtaagc
acaccttttcagactgataaacaaatgacatctttggtggagtctccagtggtagagtgt
ccagtgagtcccagtgtgttgcctcacagtgtgagtaatgatgacgatcttgtgcagaaa
gtgcctgaagctgccctaagtaatgtgtgtgtttcaccaagccaggagtcagaatgctct
gtcaacttattttcttcccagtccaacatgtctgaagaatctcctaatggagcacaagaa
ctcaagaaacatttatcacaagttcatgactgcaaacaaatgagcagtgtaaatgacagt
aaagaaacttctcagaattgtagtgtagggctgaagacaaccaaagatgaatgccaagaa
gacccagacttgggagcaaacccaggtgaagcatctggatctgacagtgaaataagtatt
gtagaagattcctgtggcccattctctcagggggaaatcctcactacacagcaaaagaat
gctatgcaaaacagcctgaaaaaacttcagcaagaaatggctgcacttgaagcagtgcta
aagcagaatggaagtcagaactgtgaagttctacctgtccatagggaactgccaccttcc
agtactggaggagcatttgaaaaggaacaaacaaggaaagaaaaaaacaggtctccagaa
ttgttgtttccatcttctaaatcttctttaacaaagagatcagatctggagaaaggccct
gagtgtgacagtgttctaaagaacaaaacttcctctgaaaagacaaaacctgtgcaggag
gcagtgcaagaacacaggcagtgtcagcttgaagcagaaaatgcagaggagcagcaatct
ggaaccaggcaaaacactgcatctgtctcatcagatctttttggaaatgtgacccagagt
ccagatcactcttcctcctctctaagttcttttatccctcaaactgcagaagccacaggt
gggcctgtcatggctcagaacactgataaaagctgtggcccaggacacaaatcaaagaga
agtgaacctgtacctgttgtacacaatgcaactgggaaacaaaatgctacaagtccagtt
gtgaccaagaggaaagtaatgtcaattgtggcatcaggtctgaatcacagtgagcatttg
gtggtccagaagtttgtgaaaaaaactcagagcactttatctaatcacattactgaagga
acaacccatgtcataatgaaaacagatgaggagctggtgtgtgaacggacactgaaatat
ttcctgggcattgcaggaggaaaatgggtagtgagttatcagtggataattcagtctttt
aaagaaggaagaatactggatgaggagccctttgaagttcgaggagatgtaatcaatggg
agaaaccatcaaggccctaagagggccaggcaggccctgactgagaagatctttaaagac
tttgagatctgttgctgtggacctttcactgacatgactacagagcatctggagtggatg
gtggagctctgtggtgcctctgtggtgaagcagcctgacctgttgtcacacacagcaaat
tctactgctgttgtggttgtgcagccagatgcttggaaggaaaacgtggattacagagca
atccagcagcagagcagtgttgccgtggtaactcgggaatgggtcctggacagcgtggct
tgctaccagtgccaggagctcagtgcttacctcgtgtcctaa
DBGET
integrated database retrieval system
