Sturnus vulgaris (common starling): 106859950
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Entry
106859950 CDS
T08833
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg00514
Other types of O-glycan biosynthesis
svg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106859950 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106859950 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svg01003
]
106859950 (RFNG)
Enzymes [BR:
svg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
106859950 (RFNG)
Glycosyltransferases [BR:
svg01003
]
Glycan extension
O-Glycan
106859950 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF1180
Motif
Other DBs
NCBI-GeneID:
106859950
NCBI-ProteinID:
XP_014743027
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MSGPCLGLRRAGVLLSLGAAALLLLLLPRGQRPAVPRPPPAAGPSAPPPHRTGPEGSAGA
PGGGAGAGAGTGAGAGAGLAGSPQLARRGRLRAAGSSARESLELKDIFIAVKTTRKYHKS
RLDLLLQTWISQARGQTFIFTDWEDQELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDK
FLESGQKWFCHVDDDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKT
TVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLL
HSPLFHSHLENLQRLQGESVLQQVTLSYGDPENRHNVVSVGGVFGLQQDPTRFKSVHCLL
YPDTIWCPAKKMS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtccttgcctggggctgcgcagggccggggtcctgctgtccctgggcgccgcc
gccctcctgctgttgctgctgccgcgggggcagcgccccgccgtgccccgcccgccgccc
gccgccgggcccagcgcgcccccgccgcaccgcacgggccccgaaggctctgccggagcg
ccgggcggcggggccggggccggggccgggaccggggccggggccggggcaggcctcgcg
ggtagcccgcagcttgcgcggaggggccgcctcagggctgccggcagctcggccagggag
agcctcgagctgaaggacatctttattgcggtgaagaccacgaggaaataccataagagc
cggctggacttgctcctccaaacctggatttcccaggcgaggggacagacgtttatattc
acagactgggaggatcaggagctacgcctgaaagcaggggatcatatgatcaacaccaac
tgttctgctgtccatacccggcaagctctctgctgcaagatgtctgtggaatatgataaa
ttcctggaatctgggcaaaaatggttttgccatgtggatgatgacaactatgtcaatcct
cggactctcctacatctcttgtctgccttctcacacagccaggatgtctatgtggggcga
ccaagtctggaccatcccatcgaagcagctgaccatgtccaaagtgatggatcaaagaca
accgtgaaattctggtttgccacaggtggagctgggttctgtatcagccgaggtcttgcc
ctgaagatgagtccctgggccagcctgggcaatttcattagtactgcagaaagagtgcgt
cttcctgacgattgcactattggctacatcatcgaaggtctgctggaagtaaagctgcta
cacagcccattgttccattcccacctggaaaatctgcagagactgcaaggcgagtctgtg
ctgcagcaggtaaccctgagttacggtgaccctgagaacagacacaatgttgtgagtgtg
ggaggagtgtttggccttcagcaagatccaacccgatttaaatctgtccattgtctgctt
tatcctgacactatttggtgccctgctaagaagatgtcataa
DBGET
integrated database retrieval system
