Sturnus vulgaris (common starling): 106861312
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Entry
106861312 CDS
T08833
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04115
p53 signaling pathway
svg04210
Apoptosis
svg05164
Influenza A
svg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106861312 (APAF1)
04115 p53 signaling pathway
106861312 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106861312 (APAF1)
05168 Herpes simplex virus 1 infection
106861312 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
APAF1_C
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WHD_APAF1
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_Aladin
NBCH_WD40
CARD
DSE1_N
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_IFT140_1st
ASA1
Beta-prop_WDR35_TULP_N
CARD_2
Beta-prop_SCAP
WD40_like
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
WDR54
TRM82_WD
AAA_16
WHD_Dark
PAC11
AAA_22
DUF2415
nSTAND6
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
106861312
NCBI-ProteinID:
XP_014745098
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDHMISDEVLTLQEEERVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDAQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPLNIEEAKDRLRLLMLRKYPRSLLV
LDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGKKYEVHVESGLAHEKGLEILSLFVNM
KISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVNK
SLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDCM
YWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTVR
ENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRQTGTFYLEWINKKSL
KNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILCC
AFSADGEFVATCSTDKKVKVWNSRTGQCKCVYEEHSEQVNCCQFNNKSGQYLLATCSNDT
YIKIWDLNKKYCRNTMMGHDNSVNHCRFSPNDEFVASCSTDGTVKLWEARSGNELKSIEI
KDFFKNADEQPDDVEVLVKCCSWSGNGEMILVVAKNKLLLFDIETCGLISQVIVSHHSTI
QYGDFCPGDELVAVALSHCSVELWNIESSSKVAYCRGHTSWVHCVTFSPDGSLFLTSSDD
QTIRIWETKKVCKSSDAVLKSELDVVFHNSEVMILAIYNQKNLQLINGNTDNVIMQTAAQ
ESPISCCCLSEDLKFAAFGLDSGTIKVLQLPDGKVLNSWEAYRTSVQHCRFTPDCQTLVL
SARDSVMQVWNWQLNECVFLRGHKEEIKDFRLLENSKILSWSFDGTVKVWNITTGNPEKD
FACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFEISSVLHELKDHEACVRCCTFSPNNK
LLATGDDKGEIRIWDVLTGALLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGYL
KWWNVTTGESLQTFYTNGTNLKSIHVSPNFSVYVTVDSLGILYVLQKF
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttatgaatcgtcaagcactggaaaatgacatc
aagacttcttatattatggatcatatgatttctgatgaagtactaacattacaggaggag
gagagagtgaagcaacagaatacacagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaaggctac
agagatcttgctgcgcttcttcaggatggcatccctgctgtctcatcgggtaacagaaag
agttcgatggatggaatgacttcctacgtgaagaccattctctgcgaagggggcgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaaaagaaattg
tactgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatgctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctcctcataaaacttcag
aatctctgtagtaggttggaacatgactccactctttcacaaagaccacttaatattgag
gaggctaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttggtc
ctggatgacatttgggattcctgggtgttaaaagcatttgataatcaatgtcaggtactc
atcacgagcagggacaggagtgtaacagatgctgtggctggcaagaaatatgaggttcat
gtggaaagtggactagcacatgagaaaggactggaaattttatccctatttgtgaatatg
aaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttctcct
cttgtgatatccttgataggtgcattactacgagacttccctagccgctgggaatactat
ctcaggcagctacagaataagcagtttaaaagaataagaaaatcttcctcatatgattat
gaagcccttgatgaagcaatgtccataagtgttgagcaactggatgacaattacaaagac
tactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctctgt
attctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaacaaa
tcactgttgttctgtgatcgtaatgggaagtcattccattattatttacatgatcttcag
cttgactttctcacagagaagaatcgcaaccagcttcaggagctacataaaaacatagta
aatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaagattgcatg
tactggtataactttctagcgtatcacatggcaggtgccaaaatgcagcaggagctccgt
gatcttatgttttctttagattggattaaagctaaaacagagttggtagggcctgctcat
ctgattcatgaatatgtagaatacagttcaatcctggatcaaaaggatagcacagtgcgt
gagaatttccaggaatttctgtctttaaatgggcaccttcttggacggcagccgtttcct
gacatcattcagctgggcctttgccagccagagacatcagaggtgtatcaacaggccaag
ctacatgctcaaaggcaaacaggaacattttatttggagtggataaataaaaaatccttg
aaaaatctctaccgtctggttgttcgtccacaccgagatgcagtttaccatgcttgcttt
tctaaggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgtttaaa
gcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgttgc
gctttttctgcagatggtgaatttgtagcaacttgttcaactgataaaaaagtcaaggtc
tggaattcaagaacaggccagtgtaaatgtgtatacgaagaacactctgagcaggtcaat
tgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgacact
tacatcaaaatttgggatttgaataaaaaatattgtagaaatacgatgatgggtcatgac
aattctgtcaatcactgcagattttcaccaaatgatgaatttgttgctagctgctcgaca
gatggaacagtaaagctttgggaagcacgctcaggaaatgaactaaaaagcattgagata
aaagatttcttcaaaaatgcagatgaacaaccagatgatgtggaggttttagtaaaatgt
tgctcttggtccggaaatggtgaaatgattttggtggtagccaaaaacaagcttctgctt
tttgatattgagacatgtggtttaataagtcaagtcattgtaagtcatcacagcacaatc
caatacggtgacttctgtcctggggatgaattagtagcagttgctttgtctcactgttct
gttgagttatggaatattgagtcttcatcaaaagtggcatattgcagaggacacacgagc
tgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgatgac
cagacaatacgaatctgggaaacaaagaaggtgtgcaagtcttctgatgctgtgctgaaa
agtgagctagatgttgtgtttcacaatagtgaagtgatgattttagccatctacaatcag
aagaatttacaacttatcaatggaaatacagataatgttattatgcagacagcagcccaa
gaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggactg
gacagtggaacaataaaggtactacagttgccagatgggaaggttctgaattcctgggag
gcctacaggacatctgtgcagcactgtcgatttacacctgattgtcagactctcgtctta
agtgctcgtgattcagttatgcaggtatggaattggcaattgaatgaatgtgtgtttcta
agagggcacaaggaagaaatcaaggattttagacttctggaaaactcaaaaattctctct
tggtcatttgatggaaccgttaaggtttggaatatcactactggaaacccagaaaaagat
tttgcttgtcatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaattt
tcatctgcttctgctgacaaaactgcaaagatctggagctttgaaatttcatctgttctt
catgaactgaaagaccacgaagcctgtgtgcggtgctgtactttctctcctaataacaaa
ctattggccactggagatgacaaaggagaaataaggatttgggacgttttaacaggtgca
ttacttcatttctgctccccagttactgtagatgaaggagaaccaacacatgggggttgg
gtaacagacctctccttttcccctgacagtaaaatgcttgtgtcatctggaggctatctt
aagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaacaaac
ctcaagtcaatacatgtgtcccctaatttcagcgtatatgtgactgttgatagtcttggt
attctttatgtattacagaagttctga
DBGET
integrated database retrieval system
