Sturnus vulgaris (common starling): 106862356
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Entry
106862356 CDS
T08833
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg00310
Lysine degradation
svg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106862356 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svg03036
]
106862356 (SETDB1)
Enzymes [BR:
svg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
106862356 (SETDB1)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106862356 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
106862356 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
YkyA
ODAD1_CC
Motif
Other DBs
NCBI-GeneID:
106862356
NCBI-ProteinID:
XP_014746800
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MDSEDIKELQQEVMEELGISMEELQEIIEKEVENSEWVRQRKQQLEELEQCMKHKEEEVA
HVDQLIDDAMRAIDKCETLAKELYSMMGLQYRESSSEDEAPAATEVIEIPDEEDDDVMSV
DSGWRRTSSSPRISRDQSLLREAMVAMRKSARDVAKFMDAVNKKTTLQEAQKDAQPPQES
PGTAQPLTVPAAPGNDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKFD
NKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDRFLI
FFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIK
TEWEGTWWKSRVEEVDGSLVKILFLEALPMGTVSSSFSFPHEDKRCEWIYRGSTRLEPMF
SMKTSTASTQEKKQSGQTRTRPNVGAVRSRGPVVQYTQDLAGAGPQYRAPEQPAAARPAS
PQPAEMECSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPAAGRAPPAPQHR
IPSSAPSQPFHGMLDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPLRTDQYRSRNPLL
IPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEMFCLD
PYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINT
SWEFLVGCDCKDGCRDKSKCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGVYEC
NKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKDGYESDAKCSSDNSGVDLKDDDDDDENTGTEELE
ESNEDSSDDNFCKDESFSTSSVLRSYATRRQTRGQRDHGASETASKDSGLTRPLGHDEPP
AAPPCKLPVSEETSKNKVASWLSSSSMAEGFQDGEGASSLRVGEAAEAKAVKMEIAADRE
KGCAANPGDLNGEAKAAKKEEPEDSTKIPGLSSLGRRYGYNPCPPKLEGIRRPMSGTLLL
QSRRQSLAPPAPLEDVLTLSSSTDSDGEHRAGQALGTNDSDDIQTISSGSEEEEGEDKKN
SSSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAGDKGESAGPVRRSTRQFYDGEEN
CYIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYN
YEVGSVEGKELLCCCGAIDCRGRLL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaggacatcaaagagctgcagcaggaggtgatggaggagctgggaatctcc
atggaggagctccaggaaatcatcgagaaagaagtggagaattccgagtgggtgaggcag
cggaagcagcagctggaggagctggagcagtgcatgaagcacaaggaggaggaggtggcc
cacgttgaccagctcattgacgatgccatgagggccatcgacaagtgcgagacgctggcc
aaggagctgtactccatgatggggctgcagtaccgggagagcagctctgaggacgaggcg
ccggcggccacagaagtgatcgagatcccggacgaggaggacgacgatgtcatgagcgtg
gactcgggctggagacgcaccagcagcagtcccaggatctccagggatcagagtctgctg
cgggaagcaatggttgccatgaggaaatctgcccgggatgttgcaaaattcatggatgct
gtaaacaagaaaacgaccttgcaggaagcacagaaagatgcacaaccccctcaggaatct
cctggcactgcccagcccctcactgtccctgcagcccctggcaatgatctcaacactgat
ggggacctcaaagtgggcatgaggattttggggaaaaaaagaaccaagacgtggcacaag
gggacgttgattgccatccagacggtcggtgctggcaagaaatacaaagtgaaatttgat
aataaagggaagagtttgctctcgggcaaccacattgcctacgattaccacccgtcagct
gagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaatcagatgtgg
ctctatgctgggatcgtggctgagacccccaacgtcaagaataaagacaggttcctgatt
ttctttgacgacggctacgcgtcctacgtgaaggagtgggagctgtacccggtgtgccgg
ccactgaagaaagcctgggaagacattgaggatgtttcctgtcgggatttcattgaggaa
tacatcactgcctaccccaaccggcccatggtgctcctgaagaatgggcagctgatcaaa
actgagtgggagggcacctggtggaaatccagagtggaagaagtggatggaagtctggtg
aaaatccttttcctggaagctcttcccatgggaactgtgagttcttccttctcgttcccc
cacgaggacaaacgttgtgagtggatttacagaggctccacacgcctcgagcccatgttc
agcatgaaaacttccacagcttccacccaggaaaagaagcagagtgggcaaaccaggact
cgtcccaacgttggtgctgtgaggagcaggggccctgtggtgcagtacacccaggattta
gcaggagctggtccccagtacagggctccagagcagccagcagctgcacgtcctgcatct
cctcagcctgcagagatggaatgctccgacacccagctggcccagggcagaaagcaggtg
gccaagaaaagcacttccttccgtcctggctccgtgggctccgggcactcgtccccgtcc
tcccctgtcctcggggacaccccggcggccgggagggccccgccggccccgcagcaccgc
atccccagcagcgccccctctcagcccttccacggcatgctggaccgcgttcctaacgag
ccatcctaccgggcccctttggagaagctcttctacctgccccacgtgtgcagctacacg
tgcctgtcgcgggtgcggccgctgcgcacggaccagtaccgcagccgcaacccgctgctc
atcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaaccgcaagatg
gggttccacgtgctctacaaaacgccctgcgggctctgcctgcgctccatgcacgagatc
gagcgctacctcttcgagaccgactgcgacttcctgttcctggagatgttctgcctggat
ccctacgtgctggtggaccgcaagttccagccctacaagccttactattacatcgccgac
atcaccaagggcaaggaggacgtgcccctgtcgtgcgtcaacgagatcgacaacacgccg
ccgccgcaggtggcctacagcaaggagaggatccccgggaaaggggtgtacatcaacacc
agctgggagttcctcgtgggctgtgactgcaaggacggctgcagagacaaatccaagtgt
gcctgtcaccagctgaccatccaggccagcggctgcacccccggagggcaaatcaacccc
aactcaggctaccagcacaagcggctggaggaatgtctgccaacaggcgtttacgagtgc
aacaagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtgcagcacggcctc
caggtgcggctgcagctcttcaagacccaaaacaagggctggggcattcgctgcctcgac
gacatcgccaagggctcctttgtctgcatctacgcagggaaaatcctgactgatgacttt
gctgacaaagaggggctggagatgggtgacgagtactttgccaacctggaccacatcgag
agcgtggagaacttcaaggacggctacgagagcgacgccaagtgctcctcggacaacagc
ggcgtggacctcaaggacgacgacgacgacgacgagaacacgggcacggaggagctggag
gagtccaacgaggacagctccgacgacaacttctgcaaggacgagagcttcagcacgagc
tcggtgctgcgcagctacgccacgcgccggcagacgcgcggccagcgcgaccacggcgcc
tcggagacggcctccaaggactcggggctcacacggcccctcggccacgacgagcccccc
gcggcccctccctgcaagctgcccgtgtccgaggagacctccaagaacaaagtggcctcg
tggctgagctccagcagcatggccgagggcttccaggacggcgagggcgcctcgtccttg
agggtgggcgaagcggcggaagccaaggctgtgaaaatggagattgctgcagacagggag
aaggggtgtgctgccaatccgggagatctgaacggagaggcaaaggcagccaagaaggag
gaacctgaagactcaaccaaaattcctgggctgagcagcctgggaaggaggtatggctac
aacccctgtccccccaagctggagggcatccgcaggcccatgagtgggaccctgctgctg
cagagccgccggcaatccctggccccaccggcccccttggaggatgtgctgacgctgtcg
agcagcaccgacagcgacggggagcacagggcagggcaggccctgggcaccaacgacagc
gacgacatccagaccatctcctcaggatccgaggaggaggaaggggaggacaagaaaaat
tcatcatctgggtcaggccccgtgaagagacaggtggctgtgaaatccacccgaggcttc
gccctcaagtccacccacggcatcgccatcaaatccacgccgctggccgcgggcgacaag
ggcgagagcgcggggcccgtgcgccgcagcacgcggcaattctacgacggcgaggagaac
tgctacatcatcgacgccaagctcgagggcaacctgggccgctacctcaaccacagctgc
accccaaacctcttcgtgcagaacgtcttcgtggacacccacgaccttcgcttcccctgg
gtcgccttcttcgccagcaagcggatccgagctggcacggagctgacctgggattacaac
tacgaggttggcagcgtggagggcaaggagctgctgtgctgctgtggggccatcgactgc
cggggccgcctgctctga
DBGET
integrated database retrieval system
