Shewanella vesiculosa: KDH10_000329
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Entry
KDH10_000329 CDS
T08322
Name
(GenBank) OmcA/MtrC family decaheme c-type cytochrome
KO
K28379
iron---cytochrome-c reductase [EC:
1.16.2.1
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_000329
Enzymes [BR:
svm01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.2 With a cytochrome as acceptor
1.16.2.1 iron---cytochrome-c reductase
KDH10_000329
Transporters [BR:
svm02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
KDH10_000329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmcA-like_N
Mtrc-MtrF_II-IV_dom
Cytochrome_C7
MtrC-MtrF_N
Cytochrom_c3_2
Cytochrom_CIII
Cytochrome_C554
Cytochrome_CBB3
Motif
Other DBs
NCBI-ProteinID:
UJL43102
LinkDB
All DBs
Position
complement(379115..381289)
Genome browser
AA seq
724 aa
AA seq
DB search
MMKTITVSPATKAVLSAGLIAFALTGCGGSDGTNGEDGPDGIIGVNIDATSTLKATFTDA
SIVDGKVSVAFNLKNANGVAVLGLTKDHDLRFGIAQLTPVTEMVGTEGAKVEVDRGYQWQ
SYINSAKQPNASWIADGETNISPSAQYQAEVEAASKCVDCLVDNLDGSYSYTFQTNIAQV
TDPISITYQADDTQRITLELKQPLITANAHYDFQPSTGLTEGIASRDVVSITACYTCHQP
ESLALHGGRRIDLENCASCHTATSGDPETGNSVDFTYMIHAIHKGQDRVTSTADGEVAAP
YKVIGYGGGLHDYGKVMYPQKPAADCSACHVEGTNAPKDAALFNANKSDTACIACHTELA
SQQHVGVGTNCTSCHVEEGYGRSAKEAHGDIMKAYNETQTMKVVFSDVTVTADNKFSTNV
SFTDASGQILPAEYIDDGSRIVMAWDSDKNYPTYQDASYSNRRIKLSEGTANTDNSWTLV
WDKVTLPTDYVGKTFELWSAVTACFNHGGYGRPEVKLTACSSDDIQTVEIKSEPYHFVMA
ASVIDDSQTAAVRRNIINTQSCQGCHNQEVYHYDNGVNCQTCHTADKTLKTDNTYPGGKK
STSFAFKAHSAEGHYLKHAGVESGTVLKTDCKTCHTADGIQLGRAADRVWRYGDIETGAD
VWMSSDTGACLSCHQKYRTDATVSHIESNGGIVDGMSEDDVHTRASEICSTCHTVERVTK
THGF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacaataacagttagtcccgctacaaaggcggtattgagtgcagggcttatt
gcttttgcgcttacagggtgtggaggcagcgatggaactaatggcgaggacggacctgac
ggcattattggtgtcaatattgatgcaacatcgaccttaaaagcaacttttactgacgca
agcatcgtcgatgggaaagtcagtgttgcctttaaccttaaaaatgccaatggcgttgcg
gtattgggactaacaaaagatcatgatctccgttttggtattgcccaattaaccccagtg
accgaaatggttggtactgagggggctaaagttgaagtagaccgtggttatcaatggcag
tcttatatcaactcggccaaacaacctaatgctagctggatagctgatggtgaaaccaac
atatctccttcagcacaatatcaagctgaggttgaagctgcatcaaagtgtgttgactgc
ttagtggataatctcgatggttcatactcatacacttttcaaactaatattgctcaagta
acagacccaataagtattacttaccaagctgatgacactcagcgtattaccttagaatta
aagcagccactaatcactgcaaatgcccattatgatttccaaccttcaaccggcttaacc
gaaggtattgcgtcacgggatgtagtatcgataacggcttgttatacctgtcatcaaccg
gaaagcttagcattacacggtggtcgtcgaatcgatcttgaaaactgtgcttcttgtcat
accgcaacatcaggcgatcctgaaaccggcaacagtgttgattttacctatatgatccat
gcgattcataaaggtcaagatcgcgtcaccagtaccgcagacggcgaagtagctgcccct
tacaaagtcattggttatggcggcggattgcacgattacggtaaggttatgtacccacaa
aagcctgctgcagattgtagtgcatgtcatgttgaagggactaatgctcccaaagatgcc
gcgctgtttaatgccaataaaagtgataccgcttgtattgcatgccatacagagttggcg
tctcaacaacatgttggtgtcggtacaaattgtacttcttgccatgtggaagaaggctat
ggtcgcagtgcaaaagaagctcatggcgatatcatgaaagcctataatgaaacccaaacc
atgaaagtagtctttagcgatgttaccgtgacagctgataacaagttcagtactaatgta
agctttactgatgccagtggtcagatattacccgctgagtatattgatgatggtagtcgt
attgtcatggcatgggacagtgacaaaaactaccctacgtatcaagatgccagttacagc
aatcgtcgtattaaattaagtgaaggtactgccaacacagataatagctggacgttagtt
tgggataaggtcaccttaccaacagattatgtgggtaaaacatttgaactatggtcagca
gtcacagcctgctttaatcatggtggctacggtagaccggaagttaaactcacggcttgc
agttctgatgatatccaaacagtggaaatcaaaagtgagccttatcattttgttatggct
gcaagtgtaatagacgatagccaaaccgctgccgtacgtagaaatattatcaatacccaa
agctgccaaggttgtcacaaccaagaagtgtatcactatgataatggtgtaaattgccaa
acatgtcataccgcagataagactcttaagactgacaacacttatcctggtggcaaaaaa
tcaaccagctttgcctttaaagctcacagtgctgaagggcattacctcaagcatgccggt
gtagaatctggcactgtgttaaaaaccgactgtaaaacctgccacacggctgatgggata
caacttggtagagccgctgacagagtatggcgttatggcgacatagaaacgggtgcagat
gtgtggatgtcatcagatactggagcatgtttaagctgtcatcaaaagtatcgtaccgat
gccactgtgtctcatattgagtccaatggcggtattgttgatggtatgagtgaagacgat
gttcatactcgtgcatctgaaatatgttcaacctgtcatacggttgaacgagtcactaaa
acccatggtttctaa
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