Shewanella vesiculosa: KDH10_000576
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Entry
KDH10_000576 CDS
T08322
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
svm
Shewanella vesiculosa
Pathway
svm01501
beta-Lactam resistance
svm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDH10_000576
01503 Cationic antimicrobial peptide (CAMP) resistance
KDH10_000576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_000576
01504 Antimicrobial resistance genes [BR:
svm01504
]
KDH10_000576
Transporters [BR:
svm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KDH10_000576
Antimicrobial resistance genes [BR:
svm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KDH10_000576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
UJL43303
LinkDB
All DBs
Position
complement(659563..662814)
Genome browser
AA seq
1083 aa
AA seq
DB search
MSIINTSVNRPVTVWMFMLAVMLFGMVGFSRLAVKLLPDLSYPSVTIRTAYDGAAPVEIE
QLVSKPIEEAVGVVKGLRKISSISRSGMSDVVLEFEWGTNMDMASLEVREKIDTIELPLD
INKPLLLRFNPNLDPIMRLAFSLPDADAEQLKQMRTFADEELKRRLEALSGVAAVRLSGG
LEQEVHIELNQQKLSQLNLNADQIKRRINEENINLSAGKVIQGDKEYLVRTLNQFNSLEE
LGQVIVYRDGQTLVRLSDVADISDAYKERSDITRIGEVESIELAIYKEGDANTVAVAQKI
RTELDKINQASEQNQLKIIYDQSEFIESAVNEVTSAALFGSLLAMLVIYLFLRDIIATLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAIGLLVDNAIVVLENIDRYKSQGMSKI
EAAVTGCKEVSGAIFASTLTTLAVFVPLVFVDGIAGALFADQALTVTFALLASLFVALTA
IPMLASRQGFTSLPQPLEVAIKPKPTSRKGKIGYYLLAVLSFPFKLLFSYLPAGLLTAII
VISRFVSSVFGLLLKPICAGFNVIYRIVESFYYRVLHHVLRHQVFTLVIALVITLASTSL
LPKLGVELIPPMNQGEFYVEILLPPGTEVSETDAVLQQLALSIKDREDVKHAYSQAGSGG
LMTSDTARGGENWGRLQVVLNDPLAFTTVSQILRNTARNIPELEAQIEHPELFSFKTPLE
IELSGYDLVQLKQSADQLVKALSESDRFSDINTTLRDGQPEISIRFDHARLAALGMDAPT
VANRIAQRVGGTIASQFTVRDRKVDILVRSELNERDQISDIESLIINPNSAQPIPLSAIA
TIDLQIGPSAINRISQQRVAIVSSNLAYGDLSEAVLQAQQILTQQQFPSSIQARFGGQNE
EMEQSFDSLKIALVLAIFLVYLVMASQFESLLHPLLILIAVPMAVAGSIIGLFITGTHLS
VVVFIGLIMLAGIVVNNAIVLVDRINQLRQEGMDKLTAINQAAQSRLRPIMMTTLTTTLG
LLPMAIGIGDGSEVRAPMAITVIFGLSMSTLLTLLVIPALYALFDRKQYTQNDDELNTAE
TPA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataatcaatacgtctgttaaccgcccggttactgtgtggatgttcatgctagca
gtgatgctttttggtatggttggattttctcgccttgcggtaaaattattacccgattta
agctatcccagtgtcactatccgtacggcctatgatggcgcggcgccagttgaaattgaa
cagctggtttcaaaaccgattgaagaagctgttggcgtggttaaaggattacgcaaaatc
agctcaatttcgcgctccggtatgtctgatgtagtactcgagttcgaatggggcacaaat
atggacatggcgagccttgaagtccgcgaaaaaatcgacactatcgagctgccattagac
attaataagccattattattgcgttttaaccccaatcttgaccccatcatgcgcttagct
ttttcattgcctgatgccgatgctgagcaactaaagcaaatgcgtacctttgcagatgaa
gaattaaaacgccgcttagaagccttatcgggggttgctgcagttaggttgtcgggagga
ttagaacaagaagttcatattgaattaaatcaacaaaaattaagccaactcaatctgaat
gccgaccaaattaagcgccgaattaatgaagagaacatcaacctatcggcaggtaaagtg
atccaaggtgataaagaatacttagtcagaaccttaaatcaatttaactctcttgaagaa
ttaggccaagtcatcgtttatcgcgatggtcaaaccttagtcagattatctgatgttgct
gatatcagtgatgcctataaagaacgcagcgacattacccgcatcggcgaagtagaatcg
attgaattggcgatctacaaagaaggtgacgccaatactgttgcggtagcgcaaaaaata
cgcacagaactcgataaaattaaccaagcaagtgagcagaatcagttaaagattatttac
gaccaatctgaatttattgaaagtgccgtgaatgaagtgacctcagctgcgttatttggc
agtttactggcgatgttagttatctacctgtttctacgtgatattattgccacacttatc
atctcaatctcaattcccttttcagttattgcgacattcaatatgatgtattttgctgat
attagcttaaatattatgtcgttaggtggcattgcattagccattggtttactggtcgac
aatgcgattgtggtattagaaaacattgaccgttataaatctcaaggcatgagtaaaatt
gaggctgcggtcacggggtgtaaagaagtctcaggggccatttttgcttcaaccctgacc
actctggcagtatttgtgcctttagtgtttgttgatggtatcgcaggcgctttatttgcc
gaccaagcactgactgtcacctttgccctgctcgcctcattgtttgtcgccttaacagcg
attcctatgctggcttcacgccaaggttttaccagtctgccgcaaccgctggaagtcgcg
ataaaaccaaaaccgactagccgtaaaggtaaaattggctattacttattagccgtgttg
agctttccctttaagctactatttagctacttacccgctggattattaaccgctattatc
gttattagtcgttttgtaagtagcgtttttggcctattacttaaacctatttgcgctgga
tttaatgtcatctaccgcatagtagaatcattttattaccgagtccttcaccatgtcctg
cgccaccaagtctttacccttgtcattgcgctagtgataactctggcatcaactagccta
ttgcctaagctcggtgttgaactgattccgccaatgaatcaaggtgagttttatgtcgaa
attttattaccgcctggcacagaagtcagtgaaacggatgcggtattacaacaattagcc
ttatcgattaaagaccgtgaggatgttaagcatgcctatagtcaagcaggcagcggcgga
ttaatgacatctgatactgctcgaggcggtgaaaactggggcagattacaagtggtacta
aatgatcctttagcctttactacggttagtcagatactgcgcaataccgccagaaatatc
cccgaactcgaagcgcagattgagcatcctgaattattcagtttcaaaaccccgcttgaa
attgagttatcaggttatgatttagtgcaacttaagcaaagtgctgatcagctggtaaaa
gccttgtctgaatcagatcgctttagtgacatcaatactaccctacgagacgggcagccg
gagatcagcattcgctttgatcatgctcgccttgctgcgttaggtatggatgcacccact
gtcgctaaccgtattgctcaacgtgtcggtggcactattgccagccaattcaccgtgcgt
gatcgtaaagtggatattttggtgcgcagtgaattaaatgagcgcgatcagatcagcgac
attgaatcattaatcattaaccccaatagcgcccagcctattccgttaagtgccatcgct
accattgacttacaaattggtccgtcagcgattaaccgcattagccaacaacgcgtggct
atcgtgtcatcgaatttggcctacggcgatttaagtgaagccgtacttcaagcacagcaa
atattgactcaacagcaatttccaagttctattcaagccagatttggtggccaaaatgaa
gaaatggaacaatcatttgactcattaaaaattgccctcgttctggccattttcttagtg
tacttagtgatggccagccagtttgaatccttgttacacccattattaattttgattgct
gtgcccatggccgtagcaggcagcattattggtttatttattaccggtactcatttaagt
gtagtggtgtttataggtttaattatgctggctgggattgtggtcaataatgccattgta
ttggtggatcgcatcaatcaactgcgccaagaaggcatggataagctcacagcaattaat
caagctgcgcaatctcgcttgcgtcctatcatgatgaccacgttaaccacaacgttaggc
ttattgcctatggcaatagggattggcgatggcagtgaggtccgcgcgcccatggcgatt
acagtgatttttggtttaagcatgtctaccttgctcacattgctggttattcctgcctta
tatgcgctatttgaccgcaaacaatacacccaaaatgatgacgagctgaacactgcggag
acgccagcatga
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