Shewanella vesiculosa: KDH10_003340
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Entry
KDH10_003340 CDS
T08322
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00300
Lysine biosynthesis
svm00550
Peptidoglycan biosynthesis
svm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDH10_003340 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KDH10_003340 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
KDH10_003340 (murE)
Enzymes [BR:
svm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KDH10_003340 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
Precursor biosynthesis
Amino acid ligase
KDH10_003340 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UJL42208
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Position
3880497..3881987
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AA seq
496 aa
AA seq
DB search
MLLNDLLAPWFHYSGRESIRGLTLNSREVQAGSLFVALPGYKVDGRSFISQAVQAGATAI
LIHTDNPDEHGLVDRLQYNVPLVYFFQLGRQLSAVAAQFYLSNRQSLSLIGITGTNGKTS
VSQIIAQIVALLGHQAAVMGTLGNGLWGQLVDSGNTTADAITIMRQLGEFIAQGTEVCAM
EVSSHGLVQGRVEAAPFEIAVFTNLSRDHLDYHGDMDSYAAAKKRLFQFPSVQHGVINID
DAVGAKWLTELANDKHKSFSIKGNTSADFYCDAIEYHDAGVTATLHFVEIDSGQRVSTPL
SSPLLGAFNLSNLLAAISALYLQGMAMASILAVIPKLVPVAGRMERFASMNKATLVVDYA
HTPDAIEQALKALKLHCKGTLWCVFGCGGDRDKGKRPLMAQAAEQYADKVMITSDNARSE
DPQTIIDDILQGISQPQNVLSQVDRIEAITRVVSLAQADDIVLLAGKGHETYQEVAGERI
DYDERALALTLSLEAS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaatgatttattagcgccatggttccattactctggtcgcgaatcgattaga
ggtttaaccctaaatagccgtgaagtgcaagctggcagtttatttgtggccctgcctggc
tataaagttgatggtcgatcattcatttctcaagcggttcaagcaggcgctacagcaata
cttatccatactgataatccagatgaacatggcttagtcgatcgccttcagtataacgtg
ccattagtgtattttttccaattaggtcggcagttatcggctgttgccgcgcagttttat
ttgtccaaccgtcagtcgttgtcattaattggtatcacaggaactaatggcaaaacttcg
gtcagccaaattatcgcgcaaatagtagccttacttggtcatcaagccgccgttatgggg
acattaggcaatggtttgtgggggcaacttgttgacagcggtaataccactgccgatgcg
atcactattatgcgtcagcttggtgaatttattgctcaaggcaccgaagtgtgtgccatg
gaagtctcaagccatggcttagtccaagggcgtgtcgaagcggcgccgtttgagattgct
gtgtttactaacctaagccgtgatcacctagattatcacggtgatatggactcttacgcc
gcggctaaaaaacgcctatttcaatttcctagtgtccaacatggggtgattaatattgat
gatgctgttggcgcaaaatggctgactgaactggcaaatgataagcataaatctttcagt
attaagggtaatacttcagccgacttttactgtgacgctattgaatatcatgatgctggt
gttactgcaacgctacattttgtcgagatcgatagcggccaacgagtaagtacgccgctt
agttcaccgttattaggtgcctttaatttatcgaatcttttggccgcgatctctgctttg
taccttcaaggaatggcaatggcatcgatattggccgtcattccaaaactggtgcctgtg
gctggtcgtatggagcgttttgcctcaatgaataaggctactttagtggtcgattacgct
catactccagatgccattgaacaagcactaaaagcgttaaaactgcactgcaaaggcaca
ttatggtgtgtatttggttgtggcggcgatcgtgataaaggtaaacggcctttaatggca
caagccgcagaacagtatgcagataaagtcatgatcactagcgataatgcccgcagtgaa
gatccgcaaaccattatcgatgatattttgcagggcattagtcaaccgcaaaatgtgctt
agccaggttgaccgtattgaagcgattacccgtgtagtgtcattggcacaagctgacgat
attgtactgcttgctggaaaaggccatgaaacctatcaagaagtggctggtgagcgaatt
gactacgatgaacgtgcgttagcattaaccttgtctctggaggcatcatga
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