Shewanella violacea: SVI_1857
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Entry
SVI_1857 CDS
T01206
Symbol
gdh
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
svo
Shewanella violacea
Pathway
svo00220
Arginine biosynthesis
svo00250
Alanine, aspartate and glutamate metabolism
svo00430
Taurine and hypotaurine metabolism
svo00910
Nitrogen metabolism
svo01100
Metabolic pathways
svo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SVI_1857 (gdh)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SVI_1857 (gdh)
00220 Arginine biosynthesis
SVI_1857 (gdh)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
SVI_1857 (gdh)
Enzymes [BR:
svo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
SVI_1857 (gdh)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BAJ01828
UniProt:
D4ZJH9
LinkDB
All DBs
Position
2137569..2142410
Genome browser
AA seq
1613 aa
AA seq
DB search
MALKDAMPSVLLENVVNLIHSKVPTTQVKQVEQFATCLYAHMSKDDLKSRNDSDLYGAVL
SLWNAANMTAKGESHIRVFNPSQSKHGWQSTHSIIEIIQPDMPFLVDSVGMALNRIGITT
HMMLHTPLSIKRSKDAITQVIYGDDNGKGKLEKVAVFLIEIGRLSSKDDIKQIEKEIASV
LGDVAASVNDWAAMSVKLDETIKDLGIRPYPGDKQELKEATDFLNYLNNHHFTLLGYRRY
DLRKVEGDLDLIPDTSSSLGLMTIKGKPQPGTGLLLSNFSESARKEALDHSLLLLTKSSE
KSRVHRPAYVDYVGVKRFDKQGNVIGEDRFLGLYASNLYNRSPREIPLLAEKVQRVLDRS
GLTPRSHDYKALMHILETLPRDELIQCNVEELAYVAHGVLEMQDRDKLKLFVRKDGFGRF
FSCLVYVSKDRYNTKLREDTQRILAQHFNSNAQVEFTTYFSESTLARTHYIVKVDSNTMD
VDVAAIENNLTEAARSWEDKLNDSLCSARGEESGTSLMKRYVTAFPRSYQEEVLPSSAVV
DILQLEALDDAHKLGMLFYLPQETALNNSKVRLKLFHKDEPIHLSDVLPMLENFGLRVIN
ERPYEIKTSVGDTYWILDFLMTVRGSTTENVAESQDRFQDALSQVWKKQLEDDGFNRLVL
ATGLTGREVSILRAYAKYMRQIDATFSQAYIEETFTRYPQLADLLVKMFIRKFNPKLKTR
TLGKFVEQIDLRLDDVSSLDDDRIIRRYLDLINATLRTNFYQVADDGANKPYLSFKFSPE
EIPEMPRPLPKFEIFVYSPRVEGVHLRGGKVARGGLRWSDRREDFRTEVLGLVKAQQVKN
TVIVPVGAKGGFVCKQLPTDGGREAFFSEGQACYRIFIRGLLDISDNIIEGEVIPPKNVV
RHDDDDPYLVVAADKGTATFSDIANSISEEYNFWLGDAFASGGSNGYDHKKMGITARGAW
ESVKRHFREIGIDCQTTDFTCLAIGDMAGDVFGNGMLLSEHIRLVAAFNHLHIFIDPNPD
APSSYKERARLFELPRSSWDDYNKELISKGGGIFLRSAKKIPLSAEMKQMLDTKKTTMTP
TELLKELLKMNVDLIWNGGIGTYVKASTETHAEVGDRANDTLRVNGDEVNARIIGEGGNL
GCTQLGRIEYATQGGRINTDFVDNVGGVDCSDNEVNIKILLNALVADGEMTLKQRNRLLV
EMTDEVGRIVLQDCNDQTRTISVTQVRGAEQLKEQIRFIHHLEKDGKLDRGLEFLPSEDE
LAERLANGKPLTRPELSVLVAYAKMVLKEQLLTPEITEDPFLSQLLIAYFPRQLQEKYSD
RMAAHPLRGEIIATSLANELVNDLGLNFVQRMQDETGASVAEAAICYTMAREIFGLADLT
TEITSLNGIIPAVVQGEMLHQLRRNIRRACRWFLRHRNRSHSIEQSVAFFSPVFADLKAN
VHGYMVESEAEGIRSEIAALVKEGVDEPIATNVVNMSTLFSALDIAQIAELEKKPISLVA
QTYFKLGARVDLHWFLEQISEQPVANHWQALARAAFREELDWQQRSLSSVVLRSCTSTCD
ADTIINQWIDSNQGLLERWFHMLADFKTSQSHEFAKFSVALRELNLLILHCEG
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaagatgcaatgccttcagtactactcgaaaacgtagtcaatcttattcat
tctaaagtacctactacacaagtaaaacaggttgagcagtttgctacctgtttgtatgca
cacatgtctaaagacgatcttaagtcccgtaatgacagtgatctttatggtgccgtatta
agtctgtggaatgccgcgaatatgaccgcgaaaggcgagtcgcatattcgagtctttaat
cccagtcagtccaaacatggttggcaatcaacacattccatcatagaaatcattcaacct
gatatgccattcttagtggactctgtgggcatggcgctaaatcgtatcggcatcactacc
catatgatgttgcatacacccttgtcgattaagcgcagcaaagatgcgatcactcaagtc
atctatggtgacgacaatggcaaagggaaactggaaaaagttgccgtattcctgattgag
atcggccggctcagtagtaaagatgatattaagcagatagaaaaagaaatagcatctgta
ctcggcgatgttgctgcctcagtcaatgactgggctgctatgtccgttaagcttgatgaa
accattaaagatcttggtatacgcccatatccgggtgataaacaagagcttaaagaggct
actgactttcttaactatctgaataatcatcactttaccctgttaggctatcgtcgttat
gatttgcgaaaagtggaaggcgatctagatcttattcctgatacgtcatcaagcctgggc
ttgatgaccattaagggtaaacctcagcctggtactggattattattgtccaatttttcg
gaaagtgcccgcaaagaagccctagatcatagcttactcctgttgactaagagcagcgaa
aaaagtcgagttcatcgtccagcttatgtggattatgtcggtgttaaacgtttcgataag
caaggtaatgtgattggggaagatagattcttaggcctttatgcctcaaatctgtataac
cgcagcccacgagagatcccattattggccgaaaaagtgcagcgcgttctcgaccgctct
ggattaacacctcgctctcatgattataaagccttgatgcacatactcgagaccttgccc
agagatgaactgatacagtgtaatgtcgaagagctagcttatgtcgcccatggcgtactc
gagatgcaagacagggacaagttaaagttgttcgtgcgtaaagatggcttcggacgcttc
ttctcttgtctagtgtatgtgtctaaagacagatacaacactaagttacgtgaagatact
caacgtatattagcccagcattttaatagcaatgcccaggttgagtttacgacctatttt
tctgaatcaacccttgcgcgtactcactatatagtgaaagtcgacagcaatactatggat
gtagatgtggccgccattgaaaataatttaaccgaagctgctcgttcttgggaagataag
cttaatgattccctctgtagtgctcgtggagaagagtcaggcacgagtctaatgaagcgt
tatgtcaccgcttttccacgcagttatcaagaagaggtcttacccagttcagccgttgta
gatattttgcaactggaagccttggatgatgctcataaacttgggatgctgttttatctc
ccccaggaaacggcattaaataacagtaaagtacgcttgaagctgttccacaaggatgag
ccgatccatctttcagatgtcttgcccatgctggaaaactttggtcttagggtgatcaat
gagcgtccctatgagataaaaacctcagttggtgatacttattggatcttagactttctg
atgacagttcggggttctaccactgagaatgttgcagagagtcaagacagattccaggac
gcgctttctcaagtctggaaaaagcagcttgaagatgatggctttaaccgtttggtcttg
gctacgggtcttaccggccgtgaagtctctatactgcgtgcttatgctaaatatatgcgt
caaattgatgcgactttcagccaagcgtatatcgaagagacgtttacccgctaccctcag
ctcgccgatttgctggttaagatgttcattcgtaagtttaaccctaaacttaagactcgt
actttaggcaagttcgttgaacagatagatctacgtttagatgatgtatctagcttagat
gatgacagaatcattcgtcgttatttggatcttattaatgccactctaagaactaacttc
tatcaagttgccgatgatggtgctaataaaccttatttatcatttaaattttcgccggaa
gagattccggagatgccacgtccactacctaaatttgagatatttgtttactcaccaaga
gtagaaggcgtacatcttaggggcgggaaagtggcccgtggtggcttgcgttggtctgac
cgacgtgaagatttcagaacagaagtgctgggcttagttaaagcgcaacaagttaaaaat
accgtgattgttcccgttggagcgaaaggtggattcgtttgtaagcagctaccaaccgat
ggtggccgcgaagccttcttctcggaaggccaagcatgttatcgaatcttcattcgtggt
ctgctcgacatctctgataacatcattgaaggtgaggttattccgccaaagaatgttgtc
cgtcatgatgatgatgacccatatctggttgttgctgcggataaaggtacggcgactttc
tctgatatcgctaacagtatctctgaggagtacaacttctggttaggtgacgcattcgcc
tctggcggtagcaatggctacgatcataagaagatgggtatcacggctcgtggtgcttgg
gagtctgttaagcgtcatttccgcgaaattggtatcgattgtcaaacaacagatttcacc
tgtttagccattggtgatatggcgggagatgtatttggcaatggtatgttgctctcggaa
catatccgtcttgttgcagctttcaaccatctgcatatcttcatcgatccaaacccagat
gcaccatccagttataaggaacgtgctcgcttattcgaactgcctcgttctagttgggat
gattacaacaaggaactgatctctaaaggcggcggaatcttccttcgctcggctaagaag
atccctctgtctgcagagatgaagcagatgttagataccaagaagacgacgatgacaccg
acagagctacttaaagagctgctgaagatgaatgtcgatcttatctggaatggtggtatc
ggcacgtatgtgaaggcatcgactgaaactcacgcagaagtgggtgatagagccaatgac
acattgcgtgtcaatggtgatgaagttaacgcaaggatcataggtgaaggcggtaactta
ggttgtactcagcttggtcgaattgagtatgccacccaaggtggacgcattaacaccgat
ttcgttgataacgtgggcggtgtcgattgttccgataatgaagtgaatattaagatctta
ctcaatgccttagttgccgatggtgagatgacgcttaagcaacgtaatcgtctcttagtt
gagatgaccgatgaagtggggcgtattgtccttcaagattgtaacgatcaaaccaggact
atctctgtgactcaggttcgtggagctgagcagcttaaagagcagatccgcttcattcat
catctggaaaaagatggcaagctagatagaggtcttgagttcttaccttcggaagatgag
ctggccgaacgcttagccaatggtaagccgttaactcgtcctgaattatctgtgctggtt
gcatacgctaaaatggtattgaaagagcagttattgacaccagaaatcaccgaagaccct
ttcttgagtcaattattgattgcttatttccctcgacaattacaagagaagtacagcgat
cgtatggctgctcatcctctgcgcggggaaattatcgcaacttcattggcaaatgaactg
gttaatgatcttggtcttaacttcgttcaacgtatgcaggatgagacaggtgcctcagtc
gccgaagccgcgatttgttatactatggcgcgtgaaatatttggtctagcagatttaacg
acagagatcacttcactcaacggtattatcccagcggtagtgcaaggtgagatgttgcat
caattacgccgtaatattcgtcgagcttgtcgttggttcctacgtcatcgtaatcgtagt
cacagtattgagcagtctgttgcatttttcagtcctgttttcgccgatttaaaagccaat
gttcacggctatatggtcgagtctgaagctgagggcatacgttcggaaattgctgcactg
gtgaaagagggtgtcgatgaacctatagcgacaaatgtggttaacatgagtacgctattt
tctgcactggatattgctcaaatagcagagttagaaaagaagcctatttcattggtcgct
cagacctatttcaagttaggtgcacgtgtcgatctacattggttcctcgaacagatcagt
gagcaaccggtcgctaaccactggcaagcacttgccagagcggcatttagagaagagtta
gattggcaacagcgttcactgagttccgtggtattaagatcatgtacctcgacttgtgat
gctgataccataattaatcaatggatagactccaaccagggcttgttggagagatggttc
catatgctcgcagactttaaaacttcgcaaagccatgagtttgccaagttctctgtcgcc
ttacgtgagttaaatcttttgattcttcattgtgaaggttaa
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integrated database retrieval system
