Shewanella violacea: SVI_3293
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Entry
SVI_3293 CDS
T01206
Symbol
tpiA
Name
(GenBank) triosephosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
svo
Shewanella violacea
Pathway
svo00010
Glycolysis / Gluconeogenesis
svo00051
Fructose and mannose metabolism
svo00562
Inositol phosphate metabolism
svo00710
Carbon fixation by Calvin cycle
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01120
Microbial metabolism in diverse environments
svo01200
Carbon metabolism
svo01230
Biosynthesis of amino acids
Module
svo_M00002
Glycolysis, core module involving three-carbon compounds
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SVI_3293 (tpiA)
00051 Fructose and mannose metabolism
SVI_3293 (tpiA)
00562 Inositol phosphate metabolism
SVI_3293 (tpiA)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SVI_3293 (tpiA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svo04147
]
SVI_3293 (tpiA)
Enzymes [BR:
svo01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
SVI_3293 (tpiA)
Exosome [BR:
svo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SVI_3293 (tpiA)
Exosomal proteins of bladder cancer cells
SVI_3293 (tpiA)
Exosomal proteins of melanoma cells
SVI_3293 (tpiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
DUF6214
Motif
Other DBs
NCBI-ProteinID:
BAJ03264
UniProt:
D4ZB69
LinkDB
All DBs
Position
complement(3735505..3736287)
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AA seq
260 aa
AA seq
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MALRRPMVAGNWKMNGSAQLAQELFKKFSTKLQDDSAEVVLCPPTIYLESVRQQLDINKE
ALNGCLVRMGAQNLSQHDFGAYTGEVSGKMLKDSGCRYVIIGHSERRRMYGETSDIVAEK
FAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIAKNGTMAFDNAIIAYEPLWAV
GTGKSATPEQAQEVHAFIRKRLSEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLI
GGVSLNSTEFLSLCSIAMSA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcattaagacgtccgatggttgctggtaactggaaaatgaatggtagtgctcaattg
gcacaagaactgtttaagaagttttctactaagctacaagatgattcagcggaagtggtt
ttatgtccaccgactatttatctagagagtgtacgacaacagttagacattaataaagaa
gccttaaatggttgtctagtcagaatgggcgcacaaaatctaagtcaacatgactttggt
gcttatactggtgaagtgtctggcaaaatgttgaaagattcaggatgtcgatatgtgatt
atcggccattccgaacgtcgccgtatgtacggagagacgagtgatatagtggcagagaag
tttgctgcggctcaaaaacatggtttgactccgatattatgtgtcggtgagtcaggtcca
gctagagaagcgagaagaacttttgaagttatcgccgaagagctagatatagtcattgca
aaaaatggcaccatggcttttgataatgcaattatcgcttacgagcctttatgggccgta
ggaactggtaagagtgctacgccagagcaggcgcaagaagttcatgcgtttatacgcaag
cgtctatctgaagtgtctccatttattggagaaaatatcaggattttgtacggtggtagc
gtaacaccgagtaatgcagcagatctttttgctcaacctgatgtagatggtggattgatt
ggcggcgtaagcttaaattcaaccgagtttttaagtttatgttccatagcgatgagcgca
taa
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