Setaria viridis (green foxtail): 117835140
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Entry
117835140 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03420
Nucleotide excision repair
svs04120
Ubiquitin mediated proteolysis
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117835140
04120 Ubiquitin mediated proteolysis
117835140
09124 Replication and repair
03420 Nucleotide excision repair
117835140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117835140
03400 DNA repair and recombination proteins [BR:
svs03400
]
117835140
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
117835140
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117835140
Multi subunit type E3
SCF complex
Ring finger protein
117835140
Cul2 complex
117835140
Cul3 complex
117835140
Cul4 complex
117835140
Cul7 complex
117835140
Cul8 complex
117835140
Cul9 complex
117835140
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117835140
TCR (transcription coupled repair) factors
Cul4-CSA complex
117835140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
117835140
NCBI-ProteinID:
XP_034570407
LinkDB
All DBs
Position
1:35478418..35480594
Genome browser
AA seq
112 aa
AA seq
DB search
MDKGGVAVAPTPAGSSAAAGKKAKRFDIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIEC
QANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggcggcgtcgcggttgccccgaccccggcgggctcctccgctgccgcgggg
aagaaggccaaacgcttcgacatcaagaagtggaacgccgtctccctctgggcctgggac
atcgtggtggacaactgcgccatctgccgcaaccacatcatggacctctgcatcgagtgc
caggcgaaccaggcgagcgccacaagcgaggagtgcaccgtcgcttggggagtttgcaac
catgcattccacttccactgcatcagtcgttggctcaagacccgtcaagtgtgccctcta
gacaacagcgagtgggagttccagaagtatggtcactag
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