KEGG   Setaria viridis (green foxtail): 117835980
Entry
117835980         CDS       T07951                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svs03400]
    117835980
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    117835980
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 117835980
NCBI-ProteinID: XP_034571213
LinkDB
Position
9:13009539..13017233
AA seq 885 aa
MSLHRLKETLHACSSSSSQPQTQPRSPPPPALLPRRPPKTSLSEQLLRLEAAAGSSSSSF
SSRIAQLPPVPRPPIEKPREDDEPTPSDEEEERKTRPISRPRPPPLPAAALESRGPYEPL
VLSPPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFL
SSVIGKGNGHEQSTDKGKKTGPVLILCPTSVIRNWENEFSEWAEFSVAVYHGPNRELVLQ
KIETQGLEVLITSFDTFRIHDKILCGISWELVVVDEAHRLKNEKSKLYTACLGITTQKRF
GLTGTIMQNKIMELFNLFDWVVPGCLGDREHFRAYYDEPLKQGQRVSAPERFVQVADARK
KHLVSVLRKFLLRRTKEETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQPDIQILINKD
LRCSCGSPLPQVECCKKTEPNGIIWSYLHRDNPDGCPICPFCLVLPCLVKLQQISNHLEL
IKPNPKDEVEKQKKDAELAAAVFGADVDLVGGSAKSENFMGLSDAEHCGKMRALERLLSL
WTQQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSLVDEFNRSPSKQVF
LISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQRRHVTVFRLLGAGSLEE
LVYSRQIYKQQLSNIAVSGKIEKRYFEGVQDDKKFQGELFGICNLFRDLSDKLFTSEIIE
MHGEHCKSSATEATGIREIVDTDLFGSQENRKSATATTDSDNQNLVDFGIVYAHRNEDVV
NMGTNGRDKDGTDETVESSSEELQSKHETKHTVKVKSSSLEQKRKVVKSYSLEQKRKEFS
QIASFIGMDDLEFSKWLLAASPVQRSEVLQKFKRKRKMKCEHNQN
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtcgctccaccgcctcaaggaaaccctccacgcctgctcctcttcctcctcccaacca
caaacccagccacgctcgccgcctcctcccgctctacttccgcgcaggcccccaaagacc
tccctttcggagcagctcctccgtctcgaggctgccgctggctcgtcgtcctcctccttt
tcttccaggatcgcacagcttccacccgttcccaggcccccgatcgagaagccgcgggaa
gacgacgaaccgacgccgtcggatgaggaggaggagagaaaaactcgccccatcagccgc
ccccgcccgcctccgctaccagcggcggccctcgagtcccgcggaccatacgagccactt
gtgctctcgccgcccggagagcaccccgtcgtccaggtgcccccatccataaattgtagg
ctacttgcgcatcagagggacggtgtgagattcttatacaatttgtatagaaacaatcat
ggtggtgtgcttggagatgacatgggtttgggaaagaccattcaaactattgctttttta
tcttctgttattggcaaaggtaatggccatgaacaatcaacagacaaaggaaagaagact
ggtcctgtactcatcctctgccctacttcagtgattcggaactgggaaaatgaattttct
gagtgggcagaattctctgttgctgtctatcatggtccaaatcgtgagttggttcttcaa
aaaattgaaactcaaggactggaggtactcattaccagttttgacactttccgaattcat
gacaagattttatgtggtatctcgtgggaacttgtggttgttgatgaggcgcaccgtctc
aagaatgaaaaatccaagttatatacggcgtgcttgggaataacaactcaaaagaggttt
ggcctcacagggaccataatgcagaataaaatcatggaattatttaatctgtttgactgg
gttgtgcctggctgcttaggggatcgagaacactttcgagcctactatgatgagcctcta
aaacagggtcagagggtaagtgctcctgagagatttgttcaagttgctgatgcacgcaag
aagcaccttgtttccgtcctcaggaaattcttgttgagaaggacaaaagaggagacaatt
ggacatcttatgcttgggaaggaggataatattgttttctgtaaaatgagtgatgttcaa
aagcgtgtttacagaagaatgctgcaacaacctgacatacagatccttattaataaggat
ctccgatgtagctgtggaagtcctttgcctcaggttgagtgttgcaaaaaaactgaacca
aatggtattatatggtcttatctccacagagacaacccggatggctgtcctatatgcccc
ttctgtcttgttcttccttgtcttgtcaagcttcagcagattagcaaccacctggagctg
ataaagcctaatccaaaggatgaggttgagaagcagaaaaaagatgctgagcttgcggct
gctgtcttcggtgcagatgttgacttagttggtggtagtgctaaaagtgaaaacttcatg
ggtctcagtgatgcagaacattgtggaaagatgcgtgcactggagaggcttctgtcattg
tggactcagcagggtgacaagattcttcttttcagttactctgtcaggatgcttgacata
ctagagaagtttctcataaggaagggttattgcttttcacgctttgatggaacaactccc
atgaatgcacgacaatcgctagtggatgagttcaacagaagccctagcaaacaggttttc
ctcatatctactcgggcaggtaatttaggtgtaaaccttgtcagtgctaaccgtgtggtg
atatttgatccaagttggaaccctgcccaagacttgcaagcacaagacagatcatttcgg
tatggacagagacgtcatgttacagtatttcgcctacttggtgctggttcgcttgaagag
cttgtttattctcgacaaatatataaacagcagctttccaacattgcagtctcaggaaaa
atagagaaacgttactttgaaggtgtgcaggatgacaagaaatttcaaggtgagctcttt
gggatctgcaatctgttccgtgacttgtctgataagctttttactagtgagattatcgaa
atgcatggagaacattgcaagagtagtgcaactgaagcaacaggaataagagaaatagtt
gatactgatttatttggttcacaagagaatagaaagtctgctactgcaacaacagattct
gacaatcagaatttggttgattttgggatagtttatgcccaccgtaacgaggacgttgtg
aacatgggaacaaatggaagagataaggatggaacagatgagactgttgagagctcctcg
gaggagctgcaaagtaagcatgaaacaaagcacactgttaaggtgaaatcttcttcactg
gagcagaaaagaaaagtggtgaaatcctattcactggagcagaaaaggaaagagttcagc
cagatcgcatctttcatcggcatggatgaccttgaattcagcaagtggttgctagcagcc
tcacctgtccagcggtccgaagtactgcagaagttcaagaggaaaaggaagatgaagtgc
gagcacaatcagaattga

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