Setaria viridis (green foxtail): 117837452
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Entry
117837452 CDS
T07951
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00280
Valine, leucine and isoleucine degradation
svs00650
Butanoate metabolism
svs00900
Terpenoid backbone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117837452
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117837452
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117837452
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
117837452
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Atx10homo_assoc
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
117837452
NCBI-ProteinID:
XP_034572972
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Position
9:complement(55406179..55411119)
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AA seq
464 aa
AA seq
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MASEAKDVGILAMDIYFPPTCVLQEELETHDGVSKGKYTIGLGQDSMAFCTDVEDVISMS
LTVVKSLLKNYNIDPKCIGRLEVGSETVIDKSKSIKTWLMQIFEEYGNTDIEGVDSSNAC
YGGTAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPISF
ESKYRGSHMAHAYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYNVFCKKYEKHEGKQFS
IFDADYVVFHSPYNKLVQKSFARLCYNDFLRNCSTVDEESREKLAPYAGLSSEESYQSRD
LEKASQQVAKNLYESKVQPTTLIPKQVGNMYTASLYAAFASVIYNRHETLAGQRIVMFSY
GSGLTSTMFSFKINEGEHPFSLLNIANVLDVSKKLEARHVVPPKKFVEALKLMEHRYGAK
DFVTSQDTSLLPAGTYYLTHVDSMYRRFYAAKDDGVTTAVSNGH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaggccaaggacgtgggcatcctcgccatggacatctacttcccgcccacc
tgcgtgctccaggaagagttggaaactcatgatggcgtgagcaaagggaaatacaccatt
ggacttgggcaggatagcatggcattctgcactgacgttgaggatgttatttctatgagc
ttgacagttgtgaagtccctcctgaaaaattataacatcgacccgaagtgcattggacgt
ttggaagttggcagtgaaacagttatagacaagagcaagtctataaagacatggctgatg
caaatatttgaggaatatggcaacactgatattgaaggagttgactcctcaaatgcatgc
tatggtggaacagctgcgttgtttaattgtgttaactgggttgaaagcaactcatgggac
gggcgttatggacttgttgtttgcacagacagtgcggtttatgctgaaggtccggctcgt
cctactggtggtgcagctgctattgcaatgttgattggacctaatgctcctatttctttt
gaaagcaaatataggggatctcatatggcccatgcatacgacttctacaagcctgatctt
gcgagtgaatatccggtggttgatggaaagctatcacagacatgctatctcatggcattg
gattcctgttataatgtattttgtaaaaagtatgaaaaacatgagggaaagcaattttca
atttttgatgcagattatgttgtattccattctccatacaacaagcttgtacagaaaagc
tttgctcgtttgtgctacaacgatttcttgagaaattgcagcacggtcgatgaagagtct
agggaaaaattggcaccctatgctggtttgtcatctgaagaaagctaccagagtcgagac
cttgaaaaggcatctcagcaagttgcgaagaacctgtacgagtccaaggttcaaccaaca
acattgatcccaaaacaagttgggaatatgtatacagcatcactctatgcggcttttgct
tcagttatctataatagacatgaaactctggcaggccagaggattgttatgttttcatat
ggaagtggcttgacatcaacaatgttctctttcaaaattaatgaaggcgagcatccattc
agcctgctaaacattgcaaacgtactggatgtttccaagaaactggaggcaagacatgtg
gtccccccgaagaaatttgtcgaggcactgaaactgatggagcaccgctatggggcaaag
gattttgtgaccagtcaggacacaagcttgttacctgcaggcacttattatctcacacac
gtcgactccatgtaccgaaggttctacgctgcgaaagatgacggtgtcaccactgcagtg
tccaatggccactga
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