Setaria viridis (green foxtail): 117839097
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Entry
117839097 CDS
T07951
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117839097
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
117839097
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GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
HEAT_EZ
Cnd3
Cnd1
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
117839097
NCBI-ProteinID:
XP_034575238
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Position
9:47290767..47296539
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AA seq
827 aa
AA seq
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MGDPDLLLSAHSAATAFPSSTRKHPAPIDEHSSDPSPSITKRPRVAAEPPVPGGSASYPE
AEVRSLVMMAGGIYPLARAEALRGLAAVLEKVDASCGVGAGLVECCYGCAVELMRDDDEG
VRLAVVRLVGLCAQKVAARMDVGSKGDNDLMDLIFQQLSSMARDMCIKVRIEAFAALGKM
QRVSEGVLLQSLSKKVIKTDTMSGCIINGQKLPPKLIIPCAAGIFAHGIEDEFYQVRSAA
CTSLGALAKFSSQYAEKALDLLMDMMNDDTEAVRLQTLQALFHMATYGYLSMQEKHMHMF
LGLLVDANALIRNAARKILGLVNLPKLQMFKSAVDGLITSLEKNPEEQDIYGILFSIGKN
HGSFSANVAKHLAKEIAMASDGELILDKPRIKALLIVSISAPFSDDKHKKLDIPSIIFSH
AVPLLGKVSCALGEEVNQDSLLSYLCHKGGMPFWGSRSISAEFGESESCKIETVEVGNQI
ENTAKATKCLDRVLVMQAIESILQTVEGAWTMKTSCNICEAQTILRTCNKELKVLAENSS
GSVGAFLSFLCEYLVAIRLIVEIWLLIQLDNSQAFGLTSHDILLEKLDISVRRMECCYAG
LNRELEVQVLELALLANLLGLSKIGACSKVVLGKLLWVINRLEGLCADGSCELSDFSREI
KKAFDANPGDTLIDNIHTLFEFFRLKPTTDFGMLKATSAVLQVCDNNSENPLSYICGLPV
GVSFNISLWNISSHHRLWLRMSIGESVQHTFLEFSSFEGNEEVKTCSMVVPLDSTPMAHS
FVLRVCLLMECSYGSISTNQGGHGGPSDCVVQLSDELDVYFVRIGQR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacccggacctcctcctctccgcccactccgccgccaccgccttcccctcctca
actcggaaacaccctgcccccatcgatgagcactcctccgatcccagcccgtccatcacc
aagcggcctagggttgcggcggagccgccggtgcctggcggctcggcctcgtaccccgag
gcggaggtccggtcgctcgtcatgatggccggaggaatctacccgctggcgcgggcggag
gcgctccgcggcctcgccgcggtcctcgagaaggtggacgccagctgcggtgtcggcgca
gggctcgtggagtgctgctacggatgcgcggtggagctcatgagggacgacgacgagggc
gtcaggttggccgtcgtgcgattggtaggcctatgtgctcagaaagttgctgcgaggatg
gatgtcggcagcaagggcgataatgatctcatggacttgattttccagcagcttagctcc
atggctagggacatgtgcataaaagtgagaattgaagcatttgctgcccttggtaaaatg
caacgagtttctgagggtgtattacttcagtcgctgtctaagaaggtcataaaaactgac
actatgagtggttgtatcatcaatggccaaaaattacctcctaagttaattattccctgt
gctgctggcatttttgcccatggaattgaagatgaattttaccaggtgcgatctgctgct
tgcacatcattgggagcactggctaagttttctagccagtatgcggagaaggccttggac
ttgttgatggacatgatgaatgatgatacagaagcagttaggctgcaaactttgcaagca
ctatttcatatggcaacatatggatatttgagtatgcaggagaagcacatgcatatgttt
cttggcttgctggttgatgccaatgccttaattcgaaatgcagcgcgcaagattcttggg
ttagtcaacctgcccaaacttcaaatgttcaaatctgcagttgatggtctcattacaagt
ttggagaaaaaccctgaggaacaagatatatatggtattctgttttccattggtaagaat
catgggagcttttctgctaatgttgctaaacatttggccaaagagatcgctatggcatct
gacggagagcttatcttggacaaacctaggatcaaagcattgttaatagtgtcaatctca
gcacctttttctgatgataagcacaagaagctggacataccttcgattatcttctcacat
gcagttcccctattgggcaaggtctcgtgtgcactaggagaagaggttaatcaggattca
ctcttatcctacttgtgtcataaaggtggaatgccattttggggaagcagatcaatatct
gcagagtttggggaatctgaaagctgcaaaattgaaactgtagaagttggtaaccaaata
gaaaatactgcaaaggcaactaagtgcctagatagagttctggtaatgcaagccattgaa
tccatactgcaaacagttgaaggagcctggactatgaaaacatcatgcaatatttgtgaa
gcccagactattttgagaacatgcaacaaagagctaaaagtattggctgaaaattcttct
ggatcagttggtgcattcttgagttttctatgtgagtatcttgttgcaataaggttgatt
gttgaaatatggctgttgattcaattggataattctcaggcttttggtctaacatcacat
gatattctactggagaagttggatatatctgtaagaaggatggaatgctgttatgctgga
ttaaatagagaattggaggttcaagtgttggagcttgctttgttagctaatttattggga
ttgtcaaagattggagcttgttcaaaggtagttctgggtaagttgctttgggtaattaat
cgcctagaaggtctgtgtgctgatgggtcctgtgagctgtctgacttcagcagagaaatt
aagaaagcctttgatgccaacccaggtgatactctgatcgacaacattcacactttgttt
gaattcttccgtctaaaaccaacaacagattttggaatgcttaaagcgacaagtgcagtg
ttgcaggtttgtgataataattctgaaaatccactatcatacatttgtgggttaccagtg
ggtgtcagctttaacatatctctgtggaacatatctagtcatcatagattgtggctccgc
atgagtattggtgagtctgtgcaacataccttcttagaattttcgtcctttgaaggtaat
gaggaggtgaagacctgttctatggttgttcctcttgattctactccaatggcgcattca
tttgttctaagagtatgtctgctgatggaatgttcatatggaagtatcagcaccaaccag
ggaggacatggaggaccgagtgattgtgtggtccaactctccgatgaactggatgtttat
tttgtcaggattgggcaaaggtag
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