Setaria viridis (green foxtail): 117851413
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Entry
117851413 CDS
T07951
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117851413
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117851413
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117851413
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
117851413
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117851413
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117851413
Prokaryotic type
Other AARSs
117851413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
117851413
NCBI-ProteinID:
XP_034589119
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All DBs
Position
4:complement(31628054..31639770)
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AA seq
1171 aa
AA seq
DB search
MEDVCEGKDFSFPAQEEGVLKLWAELDAFHEQLRRTEGGEEFVFYDGPPFATGLPHYGHI
LAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKALGITNRQQVFDLGIGKYNET
CRSIVTKYVSEWEAVVTRTGRWIDFKNDYKTMDLSFMESVWWVFAQLWEKDLVYRGFKVM
PYSTGCKTALSNFEAALDYRTVPDPAVMVSFPIVGDADNAALVAWTTTPWTLPSNLALCV
NANLTYVKVKDKSNGAVYVIAESRLGQLPVKAKASGKKQAPSKGSNAEAVQDGLDKESYE
LLAKIPGSSLVGLKYTPLFDFFLELRETAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV
CLAAGIFETAGLVVAVDDDGCFIEKISDFKGRYVKEADKDIISAVKDKGRLVSKGSIEHS
YPFCWRSGTPLIYRAVPSWFVKVEKIKDQLLECNKETYWVPDYVKEKRFHNWLEGARDWA
VSRSRFWGTPLPLWMSQDGEEIVVMDSIEKLEKLSGVKVTDLHRHYVDDITIPSKRGPEF
GVLKRVDDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGNFVAEGLDQTRGWFYTLMVL
STALFGKPAFKNLICNGLVLAEDGKKMSKSKKNYPSPTDLIDEYGADALRLYLINSPVVR
AESLRFKRSGVYGVVKDVFLPWYNAYRFFVQNAKRLEVEGLAVFSPIDQASLLKSSNVLD
HWINSATESLVSFVRQEMDAYRLYTVVPYLVKYIDNLTNIYVRLNRKRLKGRTGEGDCRI
SLSTLYHALVTTCVAMAPFTPFFTEVLYQNLRKVSDKSEESIHFCKFPSTTGERDERVEQ
SVSRMMTIIDLARNIRERHNKALKTPLKEMVVVHPDNEFLEDITGKLKEYVMEEINVKTV
TPCNDPLMYASLRAEPNFSVLGKRLGKDMGKVSNEVKKMTQEQILAFEESGEVTFFGHCL
KLDDIKVVRQFKRPENVSEKEIDAAGDGDVLVILDLRADQSLFEAGVAREVVNRIQKLRK
TAQLEPSDPVDVYYKSSGNDKNTLEQILKSQDQYIRDALGSPLVPKEMAPTDVVVLGEES
HDVHDMSFVICIARSCPVLSPDLAHASVNDDHVEALRVYLSSRSLSRLKNQFQAGKGMIT
VDCIEGYPPITLQLGKHVFLSAGDFYLASRS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgtgcgaggggaaggacttctccttcccggcgcaggaggagggggtgctc
aagctgtgggcggagctcgacgccttccacgagcagctccgccgcactgagggaggcgag
gagttcgtcttctacgacggcccccccttcgccacgggcctgccccactacggccacata
ctcgccggcaccatcaaggacgtggtcacccgccaccagtcgatgcgggggcggcacgtc
tcgcggcggttcggatgggattgccacggcctccccgtagaattcgagatcgacaaggca
ctcggcatcaccaaccggcagcaggtgttcgacctcggcatcggcaagtacaacgagacg
tgccgcagcatcgtcaccaagtacgtctccgagtgggaggccgtcgtcacgcgcacgggg
aggtggattgacttcaagaacgactacaagaccatggacctcagcttcatggagagcgta
tggtgggtgtttgcgcagctctgggagaaggacctcgtctacaggggcttcaaggtgatg
ccttacagcacaggctgcaaaaccgcactgtctaactttgaggcagcactggactacagg
actgtacctgacccagcagtaatggtatccttccctattgtcggtgatgcggacaatgcg
gctcttgttgcatggactacaacaccctggacacttccgagtaaccttgcattatgtgtc
aatgccaatctcacatatgtaaaggttaaggacaagtcaaatggagccgtatatgttatt
gcggaatctaggcttgggcagttgccagttaaggccaaagcttcaggaaagaagcaagca
ccttcaaagggaagcaatgctgaagctgttcaggatggtttagataaggaatcatatgag
ctattggcaaagattccagggtcatccttggttggcttaaaatatactcctctatttgat
tttttcttggaacttcgagagactgcctttagagtgattgcggataactatgtcactgat
gatagtggaactggtgttgtccattgtgctcctgcttttggtgaagatgaccatcgtgtt
tgccttgctgctgggatatttgagactgctggacttgttgttgctgttgatgatgatggg
tgcttcattgaaaaaatatctgattttaaagggcgatatgtcaaagaagctgacaaggat
atcatcagtgctgttaaggataaaggaagacttgttagtaaagggagcattgagcactct
tatccattttgttggcgctcgggtactcctcttatttatcgggctgttccaagctggttt
gtcaaggtcgagaagattaaggaccagttgctggaatgtaacaaggagacctactgggtg
cctgactatgttaaggaaaaaagatttcacaactggcttgaaggagctcgtgattgggct
gttagcagaagtagattctggggtactccacttccactgtggatgagtcaggatggtgaa
gaaattgttgttatggattccatcgagaaactagaaaaattatctggagtcaaggtcact
gatcttcaccgacactatgttgatgatattacaattccctctaagagaggacctgagttt
ggggtgctcaaacgtgttgacgatgttttcgactgctggttcgagagtgggtcaatgcca
tatgcctacattcattatccatttgagaataaggaactatttgaaaagaattttcctggc
aattttgttgcagagggtttagatcaaacacgcggatggttctatactctgatggtactc
tcaacagcactgtttgggaagcctgcatttaagaatcttatatgcaatggtcttgtcttg
gctgaggatggtaagaaaatgagcaagagtaaaaagaattacccttcacccacagatctc
attgatgagtatggagcggatgctttgcgactatatttgataaactcgccagttgtacgg
gcagagtctctgcgattcaaacgtagtggtgtttatggtgtcgtgaaagatgtcttcctc
ccatggtataacgcttacagattctttgttcaaaatgcaaagagacttgaagttgagggt
cttgctgtattttctccaattgaccaagcgtcacttcttaagtcatccaatgtgttagat
cactggataaactctgcaactgaaagtctagttagctttgttcgacaggagatggatgca
tatcgtctttacacggttgtgccttatttggtaaaatacatcgacaaccttactaacata
tatgtgcgattgaatcgcaaacggttgaagggacgtactggagaaggagactgcagaatt
tctctttcaacgctgtaccatgctcttgttacaacttgtgtggcgatggctccatttaca
ccgttctttactgaagttctttatcaaaatctgcggaaagtgtcagataaatctgaggag
agcattcatttctgcaagttcccctccacaaccggagagagagatgagcgtgttgagcaa
agcgtaagtaggatgatgaccataattgatcttgcacgcaatattcgtgagcggcataac
aaagctctcaaaacaccactcaaggagatggtggttgtgcatccagacaatgaatttctt
gaagacatcactgggaaacttaaagagtatgtcatggaagaaatcaatgttaagactgtc
actccatgtaatgatccattgatgtatgcttctctgcgggctgaacctaatttcagtgtc
ctaggcaaaagacttggaaaagacatgggcaaggtgtcaaatgaggtgaagaagatgaca
caggaacagatcttagcctttgaggaaagtggggaggttacattctttggtcattgcttg
aagctggacgatattaaggttgtccgacaattcaagcgtcctgaaaatgtgtcagagaag
gagattgatgctgcaggcgatggtgacgttttagtcattttagatctacgagcagatcaa
tcattatttgaagctggagttgctcgagaggttgtgaacaggatccaaaagttacggaag
actgctcagctcgaaccttctgatccggttgatgtgtattataaatcttcaggcaatgac
aaaaatacactggaacagattttgaagtcacaggatcagtatatcagagacgcacttggt
tcgccacttgtcccgaaggaaatggcaccaacagatgtggtagtacttggtgaggagtcg
catgatgtacatgacatgtcatttgtcatatgcattgcaaggtcctgccctgttctttca
ccagatcttgctcatgcctcagtcaacgatgaccatgtggaggcgttgagagtatatctt
tcatcaaggtctctttccagattgaaaaaccagtttcaagctggaaagggcatgattacg
gtcgactgcattgaaggttacccaccaatcactctacagctaggaaagcacgttttcctc
agtgcaggcgatttctatctagctagtcgatcctga
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integrated database retrieval system
