Setaria viridis (green foxtail): 117856538
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Entry
117856538 CDS
T07951
Name
(RefSeq) triosephosphate isomerase, cytosolic
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00010
Glycolysis / Gluconeogenesis
svs00051
Fructose and mannose metabolism
svs00562
Inositol phosphate metabolism
svs00710
Carbon fixation by Calvin cycle
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01230
Biosynthesis of amino acids
Module
svs_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
svs_M00002
Glycolysis, core module involving three-carbon compounds
svs_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
117856538
00051 Fructose and mannose metabolism
117856538
00562 Inositol phosphate metabolism
117856538
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117856538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117856538
Enzymes [BR:
svs01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
117856538
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117856538
Exosomal proteins of bladder cancer cells
117856538
Exosomal proteins of melanoma cells
117856538
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
C2
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
117856538
NCBI-ProteinID:
XP_034594771
LinkDB
All DBs
Position
5:40420079..40426562
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AA seq
451 aa
AA seq
DB search
MAPRKFFVGGNWKCNGTGEDVKKIVTVLSEAEVPSEDVVEVVVSPPFVFLPQVKGLLRLD
FAVAAQNCWVRKGGAFTGEISAEMLVNLQVPWVILGHSERRALLGESSDFVADKVAYALS
QGLKVIACIGETLEQREAGTTMDVVAAQTKAIAEKISDWTNVVLAYEPVWAIGTGKVATP
AQAQEVHDGLRKWLHSNVSPAVAESTRIIYGGSVNGANCKELAGQPDVDGFLVGGASLKP
EFVDIIKSATVKSSSVAFVSTGSKEDTAAAAPRLPDLERKERPRAWARAERRRRRTMGKG
VLEVHLVDAKGLYGNDFLGKLDPFVIVQYRSQERKSSVARDQGRNPRWNEVFKFQINSAA
SNAQHKLILRILDHDHFSSDDSLGEATIDVTGIISLGAERGTYTQSAAKHSIVLADNTFH
GEIKVGFTFTATQVQEDGEEIGGWRYSSFNQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaggaagttcttcgtcggcggcaactggaaatgcaacggcaccggcgaggac
gtgaagaagatcgtgaccgtgctcagcgaggccgaggtgccctcggaggacgtcgtcgag
gtggtggtgagcccgccgttcgtcttcctgccacaggtcaaggggctgctgcgcctggac
ttcgccgtcgccgcgcagaactgctgggtgcgcaagggcggtgccttcactggggagatc
agtgcggagatgctggtgaacctgcaggtgccatgggtcattttggggcactctgagcgc
agagctctgttgggtgaatccagtgatttcgttgccgataaagttgcatatgcactctcc
caaggtctcaaggtaattgcttgcattggcgaaaccctggagcagagagaagcaggaacg
accatggatgttgttgctgcgcaaacaaaggctattgctgagaagatatcagattggact
aacgttgtattggcatatgagccagtttgggctattggaactggcaaggttgcaacccct
gctcaggctcaggaggttcatgatggtctgagaaagtggctccactccaacgttagccct
gcagttgctgaatcaaccaggataatttatggagggtctgtgaatggagctaactgcaag
gagcttgcgggtcaaccagatgttgatggattccttgttggtggagcatcactgaagccc
gagttcgtggacatcatcaagtctgcgactgtcaagtcttcatctgtagccttcgttagc
accggaagcaaggaggacacagcggccgccgccccccgactccccgatctcgagaggaag
gagagaccccgggcttgggctcgtgccgagcggaggaggcgaaggacgatggggaagggc
gtcctggaggtgcacctcgtcgacgccaagggcctttacggcaacgatttcttagggaag
ctggaccccttcgtgatcgtgcagtaccggagccaggagcgcaagagcagcgtcgcccga
gaccaggggaggaacccgcgctggaacgaggtgttcaagttccagatcaactcggccgcg
tccaacgcgcagcacaagctcatcctccggatcctggaccacgaccatttttccagcgac
gactcgctcggggaagcgacgatcgacgtgacgggcatcatcagcctgggcgcggagcgc
ggcacgtacacccagagcgcggcgaagcacagcatcgtcctcgccgacaacacgttccac
ggcgagatcaaggtcggcttcaccttcaccgccacccaggttcaggaagatggagaggaa
atcggaggctggaggtacagcagctttaatcagtag
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