KEGG   Setaria viridis (green foxtail): 117857018
Entry
117857018         CDS       T07951                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-2
  KO
K07936  GTP-binding nuclear protein Ran
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03008  Ribosome biogenesis in eukaryotes
svs03013  Nucleocytoplasmic transport
svs03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117857018
   03008 Ribosome biogenesis in eukaryotes
    117857018
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117857018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117857018
   03009 Ribosome biogenesis [BR:svs03009]
    117857018
   03016 Transfer RNA biogenesis [BR:svs03016]
    117857018
   03036 Chromosome and associated proteins [BR:svs03036]
    117857018
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svs04147]
    117857018
   04031 GTP-binding proteins [BR:svs04031]
    117857018
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     117857018
Ribosome biogenesis [BR:svs03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    117857018
  Pre-60S particles
    117857018
Transfer RNA biogenesis [BR:svs03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117857018
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117857018
   Spindle formation proteins
    117857018
Exosome [BR:svs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117857018
GTP-binding proteins [BR:svs04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    117857018
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_7 AAA_22 AAA_16
Other DBs
NCBI-GeneID: 117857018
NCBI-ProteinID: XP_034595378
LinkDB
Position
5:30672995..30676335
AA seq 221 aa
MALPNQQVVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFSTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV
EAVALKPPEVQIDMAMQQQHEAELAAAAAQPLPDDDDDLIE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgttgccgaatcagcaggttgtggattaccccagcttcaagctcgtcatcgttggc
gacggtggaactgggaaaaccacatttgtgaaaaggcatcttactggggagtttgagaag
aaatatgagcccaccattggtgttgaagttcacccactggattttagcaccaactgtggt
aaaatccgcttctattgctgggacactgctgggcaagaaaagtttggtggtctcagagat
ggctactatatccatggccagtgtgccatcatcatgtttgatgtcacttcaaggctgaca
tacaagaatgtaccaacatggcacagggacttgtgcagggtgtgtgagaacattcccatt
gtcctctgtggtaacaaggttgacgtgaagaacaggcaagtcaaagccaagcaagttaca
ttccacaggaagaagaacttgcagtactatgagatttctgccaagagcaattacaacttt
gagaagcccttcctttacctcgctaggaagctggcaggggaccagaaccttcactttgtc
gaggctgttgctctgaagccaccagaagtgcagattgatatggccatgcaacaacagcat
gaagctgagcttgctgcggccgccgcgcaacccctgccagatgacgatgatgacctgatc
gagtag

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