Setaria viridis (green foxtail): 117858476
Help
Entry
117858476 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12865
polyglutamine-binding protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117858476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117858476
Spliceosome [BR:
svs03041
]
Complex B
Other components
Prp19 complex
117858476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WW
WW_USP8
Hydrolase_2
Motif
Other DBs
NCBI-GeneID:
117858476
NCBI-ProteinID:
XP_034597437
LinkDB
All DBs
Position
5:complement(43949401..43954535)
Genome browser
AA seq
492 aa
AA seq
DB search
MDSSQNQPLPPGVGTWSQAPPNHPPQFNSDPQSYHSPFDTRHDTASGNNSDSAAGIESAV
QEAVLHAQDVETQQVIQNQRYANTTSEPTAYGEDLLSNRRDPNALKEHLLKMTADHRAEM
ANKRGKPVHPNNGNVEIGNGYGVPGGGAYYAANLPSTQMNKPRDESDKAKCANDLPDFLK
QRLRARGILKDETTNKNSMNTQNVDSQEIQNKSGQELPPGWVEAKDPTTGAPYFYNQSTG
VSQWNRPGGAVNTMHHQVSPSLPENWEEAIDKSTGHRYYYNTRTQATQWEPPTPVNAIAT
PPAPTKTAVEPVAQTADIWNSQMQRCLGCGGWGVGLVQPWGYCNHCTRVQNLPFQQYPSY
PNNTMHSGGNNAPKTQGNVGAKDRSSSKPPFGKQNRKDHRKRNRPEDDELDPMDPSSYSD
APRGGWVVGLKGVQPRAADTTAAGPLFQQRPYPSPGAVLRKNAEVATHGKKRGGMAPITK
RGDGSDGLGEAD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacagctctcagaatcaaccattaccacctggtgttggaacatggtcacaggcacct
cccaatcacccaccacagttcaattctgacccacagtcttatcattctccatttgacact
agacatgacactgctagtggcaacaatagtgatagtgcagcaggcattgaatcagctgtc
caagaggctgttcttcatgcacaggacgttgagacccagcaagtcatacaaaatcaaaga
tatgcaaacacaacaagtgaacctacagcatatggggaagacttactttcgaaccgccgt
gaccctaatgcattgaaggaacacttattaaagatgacagctgatcatcgtgcagagatg
gcaaacaaaagggggaagccagttcatccaaacaatggcaatgttgaaattggcaatggc
tatggtgtaccaggagggggtgcttattatgctgcgaacttgccaagtactcaaatgaat
aaacctagagatgaatctgataaagcaaaatgtgcaaacgatctccctgattttttgaag
cagaggttaagagcaaggggaattctcaaagatgagacaacaaataagaatagcatgaat
acacagaatgtggattcccaagaaatccagaacaaatctgggcaagagttgcctcctggt
tgggttgaagcaaaggacccgaccactggtgctccttatttctacaaccaaagcactgga
gtgagtcaatggaatcgtcccggtggtgctgtgaataccatgcaccatcaagtttctcca
tccttgccagagaattgggaggaggcaattgacaaatcaacaggccacagatactattat
aatacaaggacacaggccacacagtgggagcctcctactcctgtgaacgccattgctaca
cctcctgctcccaccaaaactgcagtagagccggtcgctcaaactgcagatatttggaac
tctcaaatgcagagatgtttgggctgtggtggatggggagttggtcttgtccagccttgg
ggatactgcaatcactgcacaagggttcaaaatcttccttttcaacagtatccatcttac
ccaaacaatacgatgcactctggtggtaacaatgctcccaaaactcaggggaatgttgga
gctaaggacagatcaagctcaaaaccaccctttgggaaacagaacagaaaagatcatcgc
aaaagaaatcgcccagaagatgatgagcttgacccgatggacccaagttcttactcagat
gctccacggggtggctgggttgttggtttgaagggtgtacaaccacgagcagcggatact
actgcagctggacctttgttccaacaaagaccgtatccctcaccaggtgctgttttgagg
aaaaatgcagaagtagcaacccatggcaagaaacgtggtggtatggctcctataacaaaa
cgaggagatggcagtgatgggcttggggaggcagattag
DBGET
integrated database retrieval system
