Setaria viridis (green foxtail): 117859839
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Entry
117859839 CDS
T07951
Name
(RefSeq) 4-coumarate--CoA ligase 5
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00130
Ubiquinone and other terpenoid-quinone biosynthesis
svs00940
Phenylpropanoid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
svs_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
117859839
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
117859839
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
117859839
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Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6374
Motif
Other DBs
NCBI-GeneID:
117859839
NCBI-ProteinID:
XP_034598907
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Position
6:complement(29621881..29624295)
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AA seq
540 aa
AA seq
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MGSLTAEPQAETVFRSTLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLTFGDV
DRLSRRVAAGLRASLGVRPGGTVMLLLPNSVEFALAFLACSRLGAATTTANPLHTPPEIA
KQAAASGATVVVTEPAFVAKVRGLSGVAVVATGEGAEGCVSFSDLAAADGSALPEAAIDV
ANDVVALPYSSGTTGLPKGVMLSHRGLVTSVAQVVDGDNPNLHLREDDVVLCVLPMFHVY
ALHSILLCGMRAGAALVIMKRFDTVRMFELVERHGITIVPLVLPIAVEIAKTDAIDRHDL
SSVRMVISGAAPMGKELQDILRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPSPVKSGA
CGTVVRNAELKIIDPETGLSLHRNQPGEICIRGEQIMKGYLNNPEATAKTIDAEGWLHTG
DIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPGIADAAVVPIKDDSCGEIP
VAFVVRSDGSEITEDEIKQYVAKQVVFYKRLHKIFFVETIPKAPSGKILRKDLRAKLAAC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgctgacggcggagccgcaggccgagacggtgttccgatcgacgctcccggac
atcgccatcccggaccacctcccgctccacgactacgtgttcgagcgcctggccgaccgc
cgcgaccgcgcctgcctcatcgacggcgccacgggggagacgctcacgttcggcgacgtg
gaccgcctgtcgcgccgcgtcgccgcggggctgcgcgcctccctcggcgtgcgccccggc
ggcacggtgatgctgctcctcccaaactccgtcgagttcgcgctggcgttcctcgcctgc
tcccgcctcggcgccgccaccaccacggccaacccgctccacaccccgcccgagatcgcc
aagcaggccgcggcctccggcgctaccgtcgtcgtcaccgagccggcgttcgtcgccaag
gtgcgcgggctctccggcgtcgccgtcgtcgccacgggcgagggcgccgagggctgcgtc
tcgttctccgacctcgccgccgccgacggctcggcgctgccggaggcggccatcgacgtg
gcgaacgacgtggtcgcgctgccgtactcatccggcacgacgggcctgcccaagggggtc
atgctgtcgcaccgcgggctggtgaccagcgtggctcaggtcgtcgacggcgacaacccc
aacctccacctccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtac
gcgctgcactccatcctcctctgcgggatgcgcgccggcgcggccctcgtgatcatgaag
cgcttcgacaccgtccggatgttcgagctcgtggagcgccacggcatcacgatcgtgccg
ctcgtgctgcccatcgccgtggagatagccaagaccgacgccatcgaccgccacgacctc
tcctcggtgcgcatggtcatctccggcgccgcgcccatgggcaaggagctgcaggacatc
ctgcgcgctaagctccctcgcgccgtgctcggacagggttatggtatgacagaggcaggg
ccggtgctgtcaatgtgcatggcatttgccaaggagccatcgccggtgaagtccggcgcc
tgcggcacggtggtgaggaacgccgagctcaagatcatcgacccggagaccggcctgtcc
ctccaccgcaaccagcccggggagatttgcatcaggggcgagcagataatgaaagggtac
ctgaacaacccggaggccacggcgaagaccatcgacgcggaggggtggctgcacaccggc
gacattgggtatgtcgatgatgacgacgagatcttcatcgtggaccgcctcaaggagctc
atcaagtacaaggggttccaggtcgcccccgcggagcttgaggccatgctcatcgcgcac
ccgggcatcgccgacgccgccgtcgtcccgataaaggatgactcctgcggcgagatccca
gtggcgttcgtcgtgaggtccgacggctccgagatcaccgaggacgagatcaagcagtac
gtggcaaaacaggttgtgttctacaagaggctgcacaagattttctttgtggagactatt
cctaaggcgccatctggcaaaattttgaggaaggacctgagagccaagctggcagcgtgc
tga
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