Setaria viridis (green foxtail): 117863347
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Entry
117863347 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00020
Citrate cycle (TCA cycle)
svs00785
Lipoic acid metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01210
2-Oxocarboxylic acid metabolism
Module
svs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
svs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
117863347
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
117863347
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
117863347
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
117863347
NCBI-ProteinID:
XP_034602899
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Position
7:17038840..17046243
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AA seq
1023 aa
AA seq
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MGLFRAASGLARVALRRNLARAAGNPFAGGAVPGAAPARYFHSTRPRRFAAPAPRAVPLS
RLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAAATSPGLSGQTIQESM
RLLLLVRAYQVSGHLKAKLDPLGLEERPVPDVLDPAFYGFSEADLDREFFLGVWMMAGFL
SENRPVQTLRSVLKRLEQAYCGTIGYEYMHIPDHDKCNWLRDKIETVNPREYTYDRRQVM
LDRLIWSTQFENFLATKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRGR
LNVLGNVVRKPLRQIFSEFSGGTKPVNEGEGLYTGTGDVKYHLGTSYDRPTRGGKHIHLS
LVANPSHLEAVDPVVAGKTRAKQYYSNDRDRTKNLGVLLHGDGSFSGQGVVYETLHLSAL
ENYTTGGTIHIVVNNQVAFTTDPRSGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCEL
AAEWRQKFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKVIRSHPSALEIYQNKLLESGK
ISKEDIDRLNKKVSTILNEEFKNSKDYVPNKRDWLSAYWTGFKSPEQISRIRNTGVKPEI
LKRVGEAMTTLPENFKPHRAVKKIFDQRRKMIETGEGIDWAVGEALAFATLIVEGNHVRL
SGQDVERGTFSHRHSVIHDQETGEQYCPLDNLVMNQDEELFTVSNSSLSEFAVLGFELGY
SMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGESKWLRQTGLVVCLPHGYDGQGPEHSS
ARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTTPANYFHVLRRQIHRDFRKPL
IVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFKRLIKDQNNHKDLEEGINRLVLC
SGKVYYELDEERRKTERTDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGA
YSYINPRLVTAMKALGRGGIEDIKYVGRAPSAATATGFYSVHVQEQTELVQKALQRDPIS
YPF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggctgttccgggcggcgtccggcctggcccgggtggcgctgcggcggaacctcgcg
cgcgccgcggggaaccccttcgccggcggcgcggtccccggcgccgcgcccgcgcgctac
ttccactccacgcgcccgcgccggttcgccgcgccggcgccccgcgcggtgccgctctcg
cgcctcaccgacagcttcctcgacgggaccagcagcgtctacctcgaggagctgcagcgg
gcgtgggaggccgaccccaactccgtcgacgagtcctgggacaacttcttccgcaacttc
gtcggccaggcggccgccacctcgcccggcctctccgggcagaccatccaggagagcatg
aggctgctgctgctcgtcagggcgtaccaggtgagcggccacttaaaggccaagctcgac
ccgctcgggctggaggagcgcccggtcccggacgtgctggacccggcgttctatgggttc
tccgaggcggatttggaccgcgagttcttcctaggggtgtggatgatggcggggttcttg
tcggagaatcggcctgtgcagacgctgcgttccgtgctgaagcggctcgagcaggcctac
tgtggcacaattgggtatgagtacatgcacattccagaccatgacaagtgtaattggctc
agggataagatcgagacggttaacccaagggagtacacctatgaccgtcgccaggtcatg
ctcgataggcttatctggagcacacagtttgagaatttcttggcgaccaagtggaccacc
gcaaagcggttcggtcttgaaggtgcagagactctgatccctggcatgaaggagatgttt
gacagggcagctgatcttggtgtagagagtattgtcattggtatgccacacagaggcagg
ctgaatgttttgggaaatgtcgtccggaagcccttgcgacagatcttcagtgagttcagt
ggtggtaccaagcctgttaatgaaggggaagggttgtatacagggactggtgatgtcaag
taccatctaggaacttcatatgataggcctaccaggggtgggaaacatattcatctgtca
ctggttgcaaacccgagtcatttggaagcagttgatcctgttgttgctgggaagacaaga
gcgaaacagtactattctaatgatcgtgacaggaccaagaatttgggggtattgctgcat
ggtgacggtagtttctcagggcagggcgttgtgtatgagaccctccatcttagtgccctt
gaaaactacaccactggtgggacaatacatatcgtggtcaacaatcaggttgcgttcact
actgatccaaggtcagggagatcctcacagtattgcacggatgttgccaaagcattggat
gctccgattttccacgttaacggtgatgatttggaggccgtggttcatgtctgtgagctt
gctgcagaatggcgacaaaaattccattccgatgtggtggtggacattgtatgctaccgg
cgatttggccataatgaaattgacgagccctccttcacccaacctaaaatgtacaaggtg
atccggagccatccaagtgcgcttgagatttatcaaaataagctgttagaatctgggaag
atctccaaggaagatattgacaggttaaacaagaaggtcagcacgatactgaatgaggaa
ttcaagaacagcaaagactatgtccctaacaagagagactggctttcagcttactggact
gggttcaagtcaccagagcagatttcacgtatcagaaacaccggtgtcaagccagagatc
ctaaaacgtgttggagaagccatgactactctgccagaaaacttcaagcctcacagggct
gtgaagaagatttttgatcagcggcgtaagatgatcgagactggagaaggcattgattgg
gcagtgggtgaagcacttgcttttgctactcttatagttgaggggaaccatgtcaggtta
agtggtcaggatgttgagaggggtacattcagccaccgtcattcggtcattcatgaccag
gaaactggagagcagtactgcccgcttgataatcttgttatgaaccaagacgaggagctt
tttactgtgagcaacagttccctgtcagaatttgctgttttgggctttgagttgggttac
tccatggagaacccaaactcactggtcctatgggaagctcagtttggtgatttttcaaat
ggggcccaagtgatatttgatcagttcctgagtagtggggagtcaaaatggctccgccag
actggccttgtcgtctgccttcctcatggatatgatggtcagggacctgaacattctagt
gcaagattggagcgctttcttcagatgagtgatgacaacccttatgttatacccgagatg
gatccaacactgcggaagcaaatccagcagtgcaattggcaggttgtgaatgttacgact
cctgcaaattacttccatgttctgcgtcgccagatacaccgggacttcaggaagcctttg
attgtgatgtccccaaagaacctccttcgccacaaggactgcaaatcgaatctatctgag
tttgatgatcttgcgggccaccctggttttgacaagcaagggacacgcttcaagcggctc
ataaaggaccagaacaatcacaaggaccttgaggagggaatcaaccgtctggttctttgc
tcaggaaaggtgtactatgaactggatgaagaaagaaggaagacggagcgcactgatgtt
gctatatgtagagttgagcagctctgcccattcccctacgacctcatccagcgcgagttg
aagagatatccaaatgccgagatcgtgtggtgccaggaggagccgatgaacatgggtgca
tacagctacatcaacccgcggctggtgacggcgatgaaggcgctgggccggggcggcatc
gaggacatcaagtacgtcggcagggccccgtcggcggccaccgcgacaggcttctactcg
gtgcacgtgcaggagcagacggagctggtgcagaaggcgctgcagcgcgaccccatcagc
tatccgttctga
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integrated database retrieval system