Setaria viridis (green foxtail): 117863523
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Entry
117863523 CDS
T07951
Name
(RefSeq) uncharacterized protein At4g19900
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00601
Glycosphingolipid biosynthesis - lacto and neolacto series
svs00603
Glycosphingolipid biosynthesis - globo and isoglobo series
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117863523
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117863523
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117863523
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
117863523
Glycosyltransferases [BR:
svs01003
]
Glycan extension
P blood group
117863523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
T2SSC
E3_UBR4_N
New_glue
Motif
Other DBs
NCBI-GeneID:
117863523
NCBI-ProteinID:
XP_072150992
LinkDB
All DBs
Position
7:24778745..24783303
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AA seq
508 aa
AA seq
DB search
MRRPDRDSSSRRQSQGHVRANVHMAVAAQVQQAKSSMATPPASPTTTMPAARKPLHLLLL
SLSLPVLLLLLSLVFLLSHTTFSLLICPLLPQPPSRRNATSTSSSSSGDSLGVSMYKTLQ
AFHDSTPPSRSNVTTTSSSSASLGLSMDKTVQAFHHDSGAAPPPPPPLPAAPASAVKTTS
SSKKASAKRNKSLLKLLLRSTPQTRRFAARAGELFASPCTDRFFMTWLSPLVQFGRRELL
VLESLFRWHRGACLLVASDTMDSAGGRDRLRPFLERGLRVAAASPDFAYLLRGTPAEAWL
AAVQRGGVSPGSVPLGQNLSNLLRLALLYRYGGAYLDADVVVLRHFSGLRNAIGAQAVDE
ATGGWRRLNNAVMVFDRAHPLLHEFIAEFAAAFDGSKWGHNGPYLVSRVAARLRHRSPGL
NLTVLPPRAFYPVHWSKIGGLFVAPKDRRGERWVKAKVENIKGESFGIHLWNRESRGLEV
EEGSVIGRLISDSCLFCNSSMLVKQESQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaccagatcgagatagctcctcacgtagacaaagccaaggtcacgtacgtgct
aacgtgcacatggctgtagcggcgcaggtgcagcaagccaagagctccatggccactcct
cccgcgtctccgacgacgacgatgccggcggcgcggaagccgctgcacctgctcctcctc
tccctctcgctccccgtcctcctcctcctgctctccctcgtcttcctcctctcgcacacc
acctttagcctcctcatctgccctctcctgccgcagccgccttcacggcgcaatgcgacg
agcaccagtagtagtagcagtggtgacagcctcggtgtctccatgtacaagaccttgcaa
gcgttccatgactcgacgcccccgtcaaggagcaatgtgacgaccaccagtagtagtagc
gccagccttggtctctccatggacaagaccgtgcaagccttccaccatgactcgggggcg
gcaccaccgccaccgccgccgttgccggctgctcctgcttctgctgttaagaccaccagc
agcagcaagaaggcgtccgcgaagaggaacaagagcctcctcaaactcctgctcaggagc
acaccgcagacgcggcggttcgcggcgcgcgcgggcgagctcttcgcgtccccttgcacg
gaccgcttcttcatgacgtggctctccccactggtgcagttcggccgccgcgagctcctc
gtcctcgagagcctcttccgctggcaccgcggcgcctgcctcctggtcgcctccgacacc
atggactccgcgggcggcagggacaggctgaggccgttcctcgagcgcggcctccgcgtc
gccgccgcctcgccggacttcgcctacctcctgcgcggcacccccgccgaggcgtggctc
gccgcggtgcagcgcggcggcgtcagccccgggagcgtcccgctcgggcagaacctctcc
aacctcctccgcctcgcgctgctctaccggtacggcggcgcctacctcgacgccgacgtc
gtcgtcctcaggcacttctccggcctccgcaacgccatcggagcgcaggccgtcgacgag
gccacgggcggctggaggcgactgaacaacgccgtgatggtgttcgacagggcgcaccca
ctgctgcacgagttcatcgccgagttcgccgccgcgttcgacgggagcaagtgggggcac
aacgggccatacctggtgtcccgggtggcggcgaggctgcgccaccggagccccgggctc
aacctgacggtgctgccgccgcgggcattctaccccgtgcactggagcaagatcggcggt
ctgttcgttgcgcccaaggataggagaggcgagaggtgggtgaaggccaaggtggagaac
atcaaaggcgagagcttcggcatccacctatggaacagggagagcagggggctcgaagtg
gaagaggggagtgtcattggcaggttgatttcagacagctgcctgttctgcaattcttcc
atgcttgtaaagcaagaatcgcaatag
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