Streptomyces violaceoruber: B1H20_08380
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Entry
B1H20_08380 CDS
T05124
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00860
Porphyrin metabolism
svu01100
Metabolic pathways
svu01240
Biosynthesis of cofactors
svu03030
DNA replication
Module
svu_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
B1H20_08380
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1H20_08380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svu03032
]
B1H20_08380
Enzymes [BR:
svu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
B1H20_08380
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
B1H20_08380
DNA replication proteins [BR:
svu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
B1H20_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
ARF61421
UniProt:
A0A1V0U8H3
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All DBs
Position
complement(1893475..1894971)
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AA seq
498 aa
AA seq
DB search
MSVARQVVVEADGGSRGNPGPAGYGAVVIDPATGEPLAEAAEYIGVATNNVAEYRGLIAG
LTAAKALFPDAGEALRVHVRMDSKLVVEQMSGRWKIKHPDMKPLAARAAAILPPSSVTYE
WIPRAQNKHADRLANEAMDAGRDGRTWEASASTAALDTPSARTASAPPPVQGPPGDQAAG
AARARAALAAARGAAAPEGLFPMPGAQEPEPPVEAAPVTGAAAPAAEPSVAPGAEPSAAP
APEPSEAPVAPAPDSSAAPVAPAPDSSAAPVASAPESAATPQTGWGSAPDLRAPATLVLL
RHGETALTPQKRFSGSGGTDPELSATGRDQAERAAAHFAALGTVQEIVSSPLRRCRETAA
AVAARLGLDVHVDEGLRETDFGAWEGLTFGEVRERHGDDLTAWLASPDAAPTGGGESFAE
VAGRVAAARDRIVARYAGRTVLLVTHVTPIKTLVRLALGAPPEALFRMELSAASISTVAY
YGDGNASVRLLNDTSHLR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgcccgccaggtggtggtcgaggccgacggcggctcccggggcaacccgggg
cccgccggctacggcgcggtcgtcatcgacccggccaccggcgaaccgctcgccgaggcc
gccgagtacatcggcgtcgcgacgaacaacgtggccgagtaccggggcctgatcgccggc
ctgaccgccgcgaaggcgctgttcccggacgccggggaagcgctgcgggtccacgtccgg
atggactccaagctcgtggtcgagcagatgtcggggcgctggaagatcaagcaccccgac
atgaagccgctggccgcccgggccgcggcgatcctgccgccgtcgtccgtgacgtacgag
tggatcccgcgcgcgcagaacaagcacgcggaccggctcgccaacgaggcgatggacgcg
ggccgcgacggccgcacgtgggaggcgtccgcctcgaccgccgccctggacaccccgagc
gcccgcaccgcgagtgcgccgccgcccgtccaggggccgcccggcgaccaggcggcgggc
gccgccagggcccgtgccgcactggcggcggcccgtggcgcggcggcccccgaagggctc
ttcccgatgccgggcgcgcaggagccggagccgccggttgaggcagcgccggtcaccggg
gcggccgcaccggccgctgagccgtccgtcgcaccgggcgctgagccgtccgccgcacca
gccccggagccgtccgaagccccggtcgcaccggccccggactcgtccgccgccccggtc
gcaccggccccggactcgtccgccgccccggtcgcatcggccccggagtcggccgccacc
ccgcagaccggctggggctcggcccccgacctcagggcccccgccacgctcgtcctgctc
cggcacggcgagaccgccctcacgccgcagaagcggttctccggcagcggcggcaccgac
cccgaactgtcggccaccggccgtgaccaggccgaacgggccgccgcgcacttcgccgcc
ctgggcaccgtccaggagatcgtcagctccccgctgcgccgctgccgcgagaccgccgcg
gccgtcgccgcccggctcggcctggacgtccacgtggacgagggcctgcgcgagacggac
ttcggcgcgtgggagggcctgaccttcggggaggtgcgggagcgccacggcgacgacctc
accgcctggctggcctccccggacgccgctccgaccggcggcggcgagagcttcgcggag
gtggccgggcgggtcgccgccgcccgggaccggatcgtcgcccggtacgcgggccgcacg
gtcctcctcgtcacccacgtgaccccgatcaagacgctcgtccggctcgccctgggcgct
ccgcccgaggcgctgttccggatggagctgtcggcggcctcgatctccaccgtcgcgtac
tacggcgacggcaacgcctccgtacgcctgctcaacgacacctcgcacctgcgttag
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