Streptomyces violaceoruber: B1H20_20970
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Entry
B1H20_20970 CDS
T05124
Name
(GenBank) chloramphenicol efflux pump
KO
K18553
MFS transporter, DHA1 family, chloramphenicol resistance protein
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svu02000
]
B1H20_20970
01504 Antimicrobial resistance genes [BR:
svu01504
]
B1H20_20970
Transporters [BR:
svu02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
B1H20_20970
Antimicrobial resistance genes [BR:
svu01504
]
Gene variants
Phenicol resistance genes
Transporters
B1H20_20970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_4
Sugar_tr
Amelotin
Motif
Other DBs
NCBI-ProteinID:
ARF63570
UniProt:
A0A1V0UER6
LinkDB
All DBs
Position
4779878..4781089
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AA seq
403 aa
AA seq
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MPFAVYVLGLAVFAQGTSEFMLSGLVSGIAADLGVSLSSAGLLTSAFAVGMVVGAPLMAL
AGRAWPRRRALLFFLAVFIAVHVVGALTPSYGVLLATRFVGALANAGFWAVALTTAVALV
PDRLKGRATAVVVGGVTIACVVGVPAGAVLGEHWGWRSAFWAVALVSLPAAVAVLRAVPG
GRGTEEAAAPVPVRDELRVLTGPRLRPVLLTMALVQGATFCTFSYLEPLLTRETGLGAGW
VPVALALFGAGSFAGVTVAGRFADARPVAVVATGMTALVLGWAALALAAAHPVLVLVLIP
LLGMLAFGTGTALITRVLGLAPGAPTLAGAFSTTAFNLGATVGPWAGGLTLDAGLGYRGP
VWVSALLMVLALLTAGARGLTGRTGGAPASGRAVGRAEAGRRG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgccgtatacgtcctggggctcgcggtcttcgcccagggcacctccgaattc
atgctgtccgggctggtctcgggcatcgccgccgacctcggcgtctccctctcctccgcc
ggcctcctcacctcggccttcgccgtcgggatggtcgtcggtgcgccgctgatggcgctg
gccggccgcgcctggccgcgccgccgcgccctgctgttcttcctcgccgtgttcatcgcc
gtccacgtcgtcggcgcactcaccccgagctacggggtgctcctcgcgacccggttcgtc
ggggccctcgccaacgcgggtttctgggcggtggccctgacgaccgccgtcgcgctcgta
cctgatcggctcaagggccgggccaccgccgtcgtggtcggcggggtgacgatcgcctgc
gtggtgggcgtcccggccggcgcggtgctgggggagcactgggggtggcggtccgccttc
tgggccgtcgcactcgtctcgctgcccgccgccgtcgcggtgctgcgcgccgtcccgggc
ggccggggtacggaggaggccgccgcgcccgtccccgtacgcgacgaactgcgcgtgctg
accggcccccggctgcggcccgtgctgctgacgatggccctggtgcagggggcgacgttc
tgcacgttctcgtacctggagccgctgctgacccgggagacggggctcggggcgggctgg
gtgccggtggccctggcgctcttcggggccgggtcgttcgccggggtgacggtggcgggc
cggttcgcggacgcccgtccggtcgcggtcgtcgccacgggcatgaccgcgctcgtcctc
ggctgggcggcgctcgccctcgcggcggcccacccggtgctcgtactggtgctgatcccc
ctgctcggcatgctcgccttcggtacgggcaccgcgctgatcacccgggtcctgggcctg
gcccccggtgccccgacgctggccggagccttctcgacgacggcgttcaacctcggcgcg
acggtgggcccgtgggcgggcggcctgacgctggacgccggcctgggctaccggggaccc
gtttgggtgagcgcgctgctgatggtcctggcgctgctcacggcaggggcgcgggggctg
acggggcgtacgggaggtgcccctgcatcgggtcgtgcggtcggccgggcggaggcgggg
cgtcgaggctga
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