Sciurus vulgaris (Eurasian red squirrel): 306650900
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Entry
306650900 CDS
T11892
Symbol
ACX6B4_013332
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul00900
Terpenoid backbone biosynthesis
svul01100
Metabolic pathways
Module
svul_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
306650900 (ACX6B4_013332)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svul01006
]
306650900 (ACX6B4_013332)
Enzymes [BR:
svul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
306650900 (ACX6B4_013332)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
306650900 (ACX6B4_013332)
2.5.1.29 geranylgeranyl diphosphate synthase
306650900 (ACX6B4_013332)
Prenyltransferases [BR:
svul01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
306650900 (ACX6B4_013332)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
306650900
NCBI-ProteinID:
XP_078979440
LinkDB
All DBs
Position
X:complement(131686745..131688179)
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AA seq
314 aa
AA seq
DB search
MEKTQETVQRILLEPYKYLLQLPDFSQEVKLCPFWICGKQVRTKLSQAFNHWLKVPEDKL
QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTL
EHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLF
SDYKEDLKSLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPE
STQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELESKAYKQIEARGGNPELVA
LIKHLSKMFKEENE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaactgtccaaagaattcttctagaaccctacaagtacttactt
cagttaccagacttctcacaggaagtgaaactttgtcccttttggatatgtggtaaacaa
gtgagaaccaaactttcacaggcatttaatcattggctgaaagttccagaagacaaatta
cagattatcattgaagtgacagaaatgttgcataacgccagtttactcatcgatgatatt
gaagacaactcaaaactccgacgtggctttccagtggcacacagcatctatggaattcca
tctgtcatcaattctgccaattatgtatatttccttggcttagagaaagtcttaactctc
gaacatccagacgcagtgaaacttttcacccgccagctcttggaactccatcagggacaa
ggcctggatatttactggagggataattacacttgtcctactgaagaagaatacaaagcg
atggtgctacaaaagacaggtggactgtttggattagcagtaggtctcatgcagttgttc
tctgactacaaagaagatttaaagtcattacttaatacacttggtctcttttttcaaatt
agagatgattatgctaatctgcactccaaagaatatagtgaaaacaaaagtttttgtgaa
gatctaacagagggaaaattctcattccctactattcatgctatttggtcaaggcctgaa
agcactcaggtgcaaaacatcttgcgccaacgaacagaaaacatagatattaaaaaatat
tgtgtacattatcttgaggatgtaggttcttttgaatacactcggaatactcttaaagag
cttgaatctaaagcctataaacaaattgaggcacgtggtgggaaccctgagctagtggct
ctaataaagcacttaagtaagatgttcaaagaagaaaatgaataa
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