KEGG   Sciurus vulgaris (Eurasian red squirrel): 306653095
Entry
306653095         CDS       T11892                                 
Symbol
THBS1, ACX6B4_015527
Name
(RefSeq) thrombospondin-1 isoform 1
  KO
K16857  thrombospondin 1
Organism
svul  Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04015  Rap1 signaling pathway
svul04115  p53 signaling pathway
svul04145  Phagocytosis
svul04148  Efferocytosis
svul04151  PI3K-Akt signaling pathway
svul04350  TGF-beta signaling pathway
svul04510  Focal adhesion
svul04512  ECM-receptor interaction
svul04518  Integrin signaling
svul04820  Cytoskeleton in muscle cells
svul05144  Malaria
svul05165  Human papillomavirus infection
svul05205  Proteoglycans in cancer
svul05206  MicroRNAs in cancer
svul05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:svul00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    306653095 (THBS1)
   04350 TGF-beta signaling pathway
    306653095 (THBS1)
   04151 PI3K-Akt signaling pathway
    306653095 (THBS1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    306653095 (THBS1)
   04518 Integrin signaling
    306653095 (THBS1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    306653095 (THBS1)
   04148 Efferocytosis
    306653095 (THBS1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    306653095 (THBS1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    306653095 (THBS1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    306653095 (THBS1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    306653095 (THBS1)
   05205 Proteoglycans in cancer
    306653095 (THBS1)
  09162 Cancer: specific types
   05219 Bladder cancer
    306653095 (THBS1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    306653095 (THBS1)
  09174 Infectious disease: parasitic
   05144 Malaria
    306653095 (THBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svul04131]
    306653095 (THBS1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:svul00536]
    306653095 (THBS1)
Membrane trafficking [BR:svul04131]
 Endocytosis
  Phagocytosis
   Opsonins
    306653095 (THBS1)
Glycosaminoglycan binding proteins [BR:svul00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   306653095 (THBS1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1
Other DBs
NCBI-GeneID: 306653095
NCBI-ProteinID: XP_078982075
UniProt: A0A8D2CNK0
LinkDB
Position
2:89112170..89128643
AA seq 1171 aa
MGLAWGFIVLFLLHVCDTNRIPESGGDNSVFDIFELTGAARRGSGRRLVKGPDPSSPAFR
IENANLIPPVPDDKFQDLVDAVRADKGFLLLASLRQMKKTRGTLLAVERKDNSGQVFSVV
SNGKAGTLDLSLSVQGNQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD
VPIQNIFTRDLANIARLRIAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSAATNVL
LTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIR
KVTEENKVLANELRRPPLCYHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS
NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR
ETKACRKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDMTESQ
VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDAC
FSHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNK
NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCP
NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY
NHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE
HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD
NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDDDSVPDIDDICPENVDISETDFRR
FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA
LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY
DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggggctggcctggggattcattgttctgttcctgttgcacgtgtgtgacaccaaccgt
attccagagtctgggggagacaacagtgtttttgacatctttgaactcactggagctgcc
cgcaggggttctgggcgccggctggtgaaggggcctgacccatccagcccagctttccgc
attgagaatgccaacctgatcccccctgtgcctgatgacaagttccaagacctagtggat
gctgtgcgggcagataaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc
cggggcacactgctggccgtcgagcgtaaagacaattctggccaggtcttcagtgtggtc
tccaatggcaaggcaggcaccctggacctgagcctgagtgtgcaggggaatcagcaggta
gtgtcggtggaagaagctctcctggccactggccagtggaagagcatcaccctgtttgtg
caggaagacagggcccagctgtacatcgactgtgagaagatggagaatgctgaactggat
gtccccatccaaaacatatttaccagggacctggccaatatcgccaggctccgcattgca
aagggagatgtcaatgacaattttcagggggtgctgcagaatgtgaggtttgtttttgga
actacaccagaagacatcctcaggaacaaagggtgctccagtgcagctacaaatgtcctt
ctcactcttgacaacaatgtggtgaatggttccagccctgccatccgcaccaactacatt
ggccacaagacaaaggacctgcaagccatttgtggcatctcctgtgatgagctgtctagc
atggtcctagaactcaggggcctgcgcaccatcgtgaccacactgcaggacagcatccgc
aaagtgacggaagagaacaaagtgttggccaatgaactgaggaggcctccgctctgctat
cacaatggggttcaatataggaataatgaggaatggactgtggatagctgcactgagtgt
cactgtcagaactcagtcaccatctgcaaaaaggtgtcctgtcccattatgccctgctca
aatgccactgttcctgatggagaatgctgcccacggtgttggcccagtgactctgcggat
gatggctggtccccttggtctgagtggacctcctgctctgcaacgtgtggcaatggaatt
cagcagcgcggccgctcctgtgacagcctcaacaaccgatgcgagggctcctcagtgcag
acacggacctgccacattcaggagtgtgacaagagatttaaacaggatggcggctggagc
cactggtcaccatggtcatcttgttctgtgacatgtggtgatggtgtgatcacaaggatt
cggctctgcaactctcccagcccccagatgaatgggaaaccatgtgaaggcgaagcccgg
gagaccaaagcctgcaggaaagacgcctgccccatcaatggaggctggggtccctggtca
ccttgggacatctgttctgtcacctgtggaggaggggtacaaaaacgtagccggctctgc
aacaatcccacaccccagtttggaggcaaagactgcattggtgatatgacagaaagccaa
gtctgcaacaagcaggactgtccaattgatgggtgcctgtccaatccctgctttgctggt
gccaagtgtaccagctatcctgatggcagctggaaatgtggtgcttgtcctcctggttac
agtggaaatggcatccagtgcaaagatgttgatgagtgtaaagaagtgcctgatgcctgc
ttcagccacaatggggagcacagatgtaagaacacagaccctggctacaactgcttgccc
tgccctccacgcttcactggctcacagcccttcggacggggtgtcgagcatgccatggcc
aacaaacaggtatgcaagccccgaaacccctgcacagacgggacacatgactgcaacaag
aatgccaaatgcaactacctgggccactacagtgaccccatgtaccgctgtgagtgcaaa
cctggctatgctggcaatggcatcatctgcggggaggacacagacctggatggctggcca
aacgaggacctggtgtgtgtggccaatgcaacttaccactgcaaaaaggacaactgtccc
aaccttcccaactcagggcaggaagactatgacaaggatggaattggtgatgcctgtgat
gatgatgatgacaatgacaaaattccagatgatagggacaactgtccattccattacaac
cctgcccagtatgactatgacagagatgatgtgggagaccgctgtgacaactgcccctac
aaccataacccagaccaggcagacacagacaataacggggaaggagatgcctgcgctgca
gacattgatggagatggtatcctcaacgaacgggacaactgccagtatgtctataatgtt
gaccagagggacactgatatggatggggttggagatcagtgtgacaactgccccctggaa
cataatccggatcagctggactctgactctgaccgcattggggatacctgtgacaacaat
caggacattgatgaagatggccaccagaacaacctggacaactgtccctatgtgcccaat
gctaaccaggctgaccatgataaggatggcaagggagatgcttgtgaccatgatgacgac
aatgatggcattcctgatgacagggacaattgcaggctggtgcccaatcctgaccagaag
gactctgatggcgatggtcgaggtgatgcttgcaaagatgactttgacgatgacagtgtg
ccagacattgatgacatctgtcctgagaatgttgacatcagtgagaccgatttccgccga
ttccagatgattcctctagatcccaaagggacatcccaaaatgaccctaactgggttgtc
cgccatcagggtaaagagctcgtgcagactgtcaactgtgatcctggacttgctgttggt
tatgatgagtttaatgctgtggacttcagtggcaccttcttcatcaacaccgaaagggat
gacgactacgctggatttgtgtttggctaccagtccagcagccgtttttatgttgttatg
tggaagcaagtcacccagtcctactgggacaccaaccctacaagggctcagggatactca
ggcctttcagtgaaagttgtgaactctaccacagggcctggcgaacacctgcgaaatgcc
ctgtggcacacaggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcac
ataggctggaaagatttcactgcctacagatggcgtctcagccacaggccaaagacaggt
ttcattagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctat
gacaaaacctatgctggtggtcggctaggattgtttgtcttctctcaagaaatggtgttc
ttctctgacctgaaatatgaatgtagagattcctaa

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