Sciurus vulgaris (Eurasian red squirrel): 306662434
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Entry
306662434 CDS
T11892
Symbol
APAF1, ACX6B4_024866
Name
(RefSeq) apoptotic protease-activating factor 1 isoform 1
KO
K02084
apoptotic protease-activating factor
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul01524
Platinum drug resistance
svul04115
p53 signaling pathway
svul04210
Apoptosis
svul04215
Apoptosis - multiple species
svul05010
Alzheimer disease
svul05012
Parkinson disease
svul05014
Amyotrophic lateral sclerosis
svul05016
Huntington disease
svul05020
Prion disease
svul05022
Pathways of neurodegeneration - multiple diseases
svul05134
Legionellosis
svul05152
Tuberculosis
svul05160
Hepatitis C
svul05161
Hepatitis B
svul05162
Measles
svul05164
Influenza A
svul05168
Herpes simplex virus 1 infection
svul05169
Epstein-Barr virus infection
svul05200
Pathways in cancer
svul05222
Small cell lung cancer
svul05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
306662434 (APAF1)
04215 Apoptosis - multiple species
306662434 (APAF1)
04115 p53 signaling pathway
306662434 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
306662434 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
306662434 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
306662434 (APAF1)
05160 Hepatitis C
306662434 (APAF1)
05164 Influenza A
306662434 (APAF1)
05162 Measles
306662434 (APAF1)
05168 Herpes simplex virus 1 infection
306662434 (APAF1)
05169 Epstein-Barr virus infection
306662434 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
306662434 (APAF1)
05152 Tuberculosis
306662434 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
306662434 (APAF1)
05012 Parkinson disease
306662434 (APAF1)
05014 Amyotrophic lateral sclerosis
306662434 (APAF1)
05016 Huntington disease
306662434 (APAF1)
05020 Prion disease
306662434 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
306662434 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
306662434 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
306662434 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
APAF1_C
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
NB-ARC
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_NOL10_N
CARD
NBCH_WD40
Beta-prop_WDR41
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_VPS8
DSE1_N
RMC1_N
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
ASA1
Beta-prop_SCAP
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_like
TRM82_WD
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
CARD_2
Beta-prop_SPT8
Ge1_WD40
PAC11
PEP5_VPS11_N
Beta-prop_Nup120_160
Utp8_b_propeller
Beta-prop_DCAF12
AAA_16
Beta-prop_RSE1_2nd
AAA_22
NPHP3_N
DUF2677
AAA_18
NACHT
nSTAND6
ATPase_2
Motif
Other DBs
NCBI-GeneID:
306662434
NCBI-ProteinID:
XP_078998221
LinkDB
All DBs
Position
5:158735204..158836024
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGVLTVSEEEKVKNQPTKHQRAAVLIKLI
LKKDNYSYISFYNALLHEGYKDLAALLHSGIPEISSSSGKDSDGGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLFKLNGDPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFPG
GVHWVSVGKQDKSGLLMKLQNLCSRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDSWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLICDRNGKSFRYYLHDLQIDFLTEKNRSQLQDLHKKMITQFQRYYQLHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLRAKQEVDNGMLYLEWINK
KNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSTDDKFIATCSVDKKVKIWNSVTGELVHTYDEHSEQVNCCHFTNKSHPLLLATGS
SDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLKLWDVRSANERKS
INMKQFFLNSEDPQDEIEVIVKCCSWSADGARIMVAAKNKIFLFDIYTSGLLAEIHTGHH
STIQYCDFSPQNHLALVALSQYCVELWNIDSCAKVADCRGHLSWVHGAMFSPDGSSFLTS
SDDQTIRVWETKKVCKSSAIVLKQDVDVVFQENEVMVLAVDSGKHLQLINGKTGQVDYLT
EAQVSCCCLSPHLQYVAFGDEDGAIQILELLNNRVFQSRIGHKKAVRHIQFTADGKTLIS
SSDDSSIQIWNWQSEEYVFLQAHQEAVKDFRLLKNSRLLSWSFDGTVKVWNIITGQMEKD
FVCHQGTVLSCDISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNGCVRCSAFSVDSS
LLATGDDNGEIRIWNVSNGELLHSCAPISVEEGAATHGGWVTDLCFSPDSKMLVSAGGHL
KWWNVETGESLQTFYTNGTNLKKIHVSPDFKTCVTVDNLGILYILQILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtctacttcaacatagagaagctctggaaaaggacatt
aaaacatcctacatcatggatcacatgattagtgatggagttttaacagtgtcagaagag
gaaaaagtaaagaatcagcccacaaaacatcagcgagcagctgtgctaattaaattgata
cttaaaaaagacaattattcctatatatcattctacaacgctctactacacgaaggatat
aaagatctggctgcccttcttcacagtggcattcctgagatttcgtcttccagtggcaaa
gattcagatggtggaataacttcctatgtaaggacagtgctgtgtgaaggtggagtacca
caaagaccagttgtttttgttactaggaagaagctggtgaatgcaattcaacagaaactc
ttcaaactgaatggcgacccaggatgggtcaccatatatggaatggcaggctgtgggaag
tctgtattagctgcagaagctgttcgagatcattcactcctagaaggttgtttccccggg
ggtgtgcattgggtttcagttggaaaacaagacaaatctggacttctgatgaaactgcag
aatctctgctcacggttggatcaggatgagagtttctcccagaggcttcctcttaacatt
gaagaggctaaagaccgtctccgcattctaatgctgcgcaaacacccaaggtctctattg
atcttggatgacatttgggattcttgggtgttaaaagcatttgacaatcagtgtcagatt
cttcttacaaccagagacaagagtgttacggattcagtaatgggtcctaaatatgtagtc
cctgtggagagtggccttggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaaaaaagcagatttgccagaacaagctcatagtattataaaagaatgcaaaggttct
cctcttgtggtgtctttaattggtgcacttttacgtgattttcctaaccgctgggagtac
tacctcaggcaactgcagaacaagcagtttaagagaataaggaaatcttcatcttatgat
tatgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaagacattaaa
gattattacacagatctttctatccttcagaaggatgttaaggtgcctacaaaggtgtta
tgtattctctgggacatggaaactgaagaagttgaagacatattgcaggagtttgttaat
aagtctctcttaatctgtgatcggaatggaaagtcgtttcgttattatttacatgatctt
caaatagattttcttacagagaagaatcgcagccaacttcaggatctacataagaagatg
atcactcagtttcagaggtattaccagcttcatactctttccccagatcaggaggactgc
atgtattggtacaactttctggcttatcacatggctagtgccaatatgcacaaagaactt
tgtgctttaatgttttccctggattggattaaggccaaaacagaacttgtaggccctgct
catctgattcatgaatttgtggaatataggcatatattggatgaaaaggattgtgcagtc
tgtgagaattttcaggagtttttatctttaaatggacaccttcttggacgacagccattt
cctaatattgtacaactgggtctctgtgaaccagaaacttcagaagtttatcagcaagca
aagctgcgagccaagcaggaggtcgataacgggatgctttacctggagtggataaacaaa
aaaaacatcaagaatctctcccgcttagttgtccgcccccatacagatgctgtttaccac
gcgtgcttttctgaggatggccagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaaacttttagaaatcaaagctcatgaggatgaagta
ctttgttgtgcattctctacggatgacaaatttatagcaacctgctcagtggataaaaaa
gtaaagatttggaattctgtgactggggaactagtccacacctatgatgaacactcagag
caagtcaattgttgccatttcaccaacaagagtcatccccttctcttagccactgggtca
agtgattttttcctcaaactttgggatttgaatcaaaaagaatgtcgaaataccatgttt
ggccatacaaattcagtcaatcactgtagattttcaccagatgatgagcttttggccagt
tgttcagctgatggaacattaaagctttgggatgtgagatcagcaaacgagaggaaaagc
attaatatgaagcagttcttcctaaattcagaggaccctcaagatgagatagaagtgata
gtgaaatgttgttcctggtcggctgatggtgctagaataatggtggcagcaaaaaataaa
atttttctttttgatatttataccagtggcctgttggcagaaatccacacaggccatcat
agcaccatccagtactgtgacttctcccctcagaaccatttggcactggtggctttgtcc
caatactgtgtggagttatggaatatagactcatgtgcaaaggtagctgattgcagagga
catctaagttgggttcatggtgcgatgttttctcctgatggatcatcatttttgacgtct
tcagatgaccaaacaatcagggtttgggagacaaagaaggtatgtaagagctctgctatt
gtgttaaagcaagatgtagatgttgtatttcaagaaaatgaagtgatggtccttgcagta
gacagtggaaaacatctgcaactcattaatggaaaaacaggtcaagttgattacctgact
gaagctcaagttagctgctgttgtctaagcccacatctgcagtacgtggcatttggagat
gaagatggagccatccagattttagaacttctaaacaacagagtcttccaatccagaatt
ggtcacaagaaagctgtaaggcacatccagttcacagctgatgggaagactcttatttca
agttccgatgattcttcaattcagatatggaattggcaatcagaggaatatgtttttctg
caagcccatcaggaagcagtgaaagacttcaggcttctaaaaaattcacgattgctttct
tggtcatttgatggaacagtgaaggtatggaatattattactggacaaatggaaaaagac
tttgtctgtcaccaaggtacagtactttcttgtgatatttcttctgatgctaccaagttt
tcatctacctctgctgataagactgcaaagatttggagctttgaactcccttcccctctt
catgagttgaaaggccacaatggctgtgtccgctgctcagccttctctgtggacagttcc
ctgctggcaactggagatgacaatggagaaatcaggatatggaacgtctcaaacggcgag
cttcttcactcctgtgctccgatttcagtagaagaaggagctgctacccatggaggctgg
gtgaccgacctttgcttttctccagacagcaaaatgcttgtctctgctggaggacatctt
aagtggtggaatgtggagacaggggagtctttgcagaccttctacacaaatggaaccaat
ctcaagaaaatacacgtgtccccagacttcaaaacatgtgtgactgttgacaatcttggt
attttatatattttacagattttagagtaa
DBGET
integrated database retrieval system
