Shewanella woodyi: Swoo_0319
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Entry
Swoo_0319 CDS
T00676
Name
(GenBank) 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
swd
Shewanella woodyi
Pathway
swd00010
Glycolysis / Gluconeogenesis
swd00020
Citrate cycle (TCA cycle)
swd00620
Pyruvate metabolism
swd00785
Lipoic acid metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd01200
Carbon metabolism
swd01210
2-Oxocarboxylic acid metabolism
Module
swd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Swoo_0319
00020 Citrate cycle (TCA cycle)
Swoo_0319
00620 Pyruvate metabolism
Swoo_0319
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Swoo_0319
Enzymes [BR:
swd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Swoo_0319
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Paralog
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
ACA84620
UniProt:
B1KNC3
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Position
394245..396908
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AA seq
887 aa
AA seq
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MSEHMLQDVDPLETNEWLSALESVVREEGVERAQYLLEQVLDKARLDGVDMATGITTNYI
NTIPTSQEPAYPGNTTLERRIRSIIRWNAIMIVLRASKKDLDLGGHMASFQSAASFYEVC
FNHFFRAPNEVDGGDLVYYQGHISPGIYSRAFVEGRLTEEQLDNFRQEVDGKGIPSYPHP
KLMPEFWQFPTVSMGLGPMSAIYQARFLKYLDGRGLKDTSAQRVYAFLGDGEMDEPESRG
AISFASREKLDNLCFLINCNLQRLDGPVMGNGKIIQELEGLFRGAGWNVVKVIWGNNWDS
LLAKDTTGKLLQLMNETIDGDYQTFKSKDGAYVREHFFGKYPETAALVSDMTDAEIFALK
RGGHESSKLFAAFKNAQDTKGKPTVILAKTVKGYGMGEAAEGKNIAHGVKKMDMTHVLQL
RNRLGLDDLLTDEKVSELPYLKLEEGSEEYNYLHARRNGLHGYTPQRLPNFTQALDLPSV
EEFGPLLTEQKREISTTMAFVRTLNILLKNKGIGKNIVPIIADEARTFGMEGLFRQIGIY
NPYGQEYTPEDRSVVSYYKEATSGQVLQEGINELGAMSSWVAAATSYSTNDLPMIPFYIY
YSMFGFQRVGDMAWMAGDQQARGFLLGATAGRTTLNGEGLQHEDGHSHVQANTIPNCISY
DPTYAYELAVIMQDGIRRMYGENQENVFYYLTLMNENYAMPAMPEGAEEGIRKGIYKLES
YKGSNKVQLMSSGTIMNEVRKAAQILSEEYDVASDVYSVTSFNELTREGQDVERFNMLHP
EAEQKQAYITQVMGTEPAIAATDYMKNYAEQVRAFMPSETFKVLGTDGFGRSDSRENLRR
HFEVNAGYVVVAALNELAKRGDIEKSVVAKAIAKFNIDADKTNPLYA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacatatgctacaagacgtagatccactagaaactaacgagtggttgtctgct
ctagaatctgttgtacgtgaagagggggttgagcgtgctcagtatcttctggaacaagta
cttgataaggcccgtctagacggtgtcgatatggcgactggtatcaccaccaactatatc
aacacaattcctacgagccaagagcctgcatatcctggcaatacaacgcttgagcgtcgt
attcgttctatcattcgttggaacgcgatcatgatagtgctacgtgcgtctaagaaagat
ttagacctaggtggccatatggcttctttccagtctgcagcttcattttatgaagtctgt
tttaatcatttcttccgtgcaccaaatgaagtcgatggtggtgatttagtttactaccaa
ggccatatctctccaggtatctattctcgtgcatttgttgaaggtcgtttgactgaagag
cagttagacaacttccgtcaagaagtcgatggtaaaggtataccttcatacccacatcca
aagctaatgcctgagttctggcagttcccgactgtatctatgggtcttggcccaatgtca
gccatttatcaagcacgcttccttaagtatcttgatggacgtggtttaaaagacacctct
gcacagcgcgtatatgctttcttaggtgatggtgagatggatgagcctgaatctcgtggc
gcaatctctttcgcttctcgtgaaaagctagataacctatgtttcttgatcaactgtaac
ttacagcgcctagatggtcctgtaatgggtaacggtaaaatcattcaggagcttgaaggt
ctatttagaggcgcgggctggaatgtcgttaaagtgatctggggtaataactgggactca
ctattagcaaaagataccactggtaagttactgcagttgatgaacgaaaccatcgatggt
gattaccaaacatttaagtcaaaagatggtgcttatgtacgtgagcatttcttcggaaag
tacccagaaactgcggcgcttgtgtctgatatgacagatgctgagatcttcgcgcttaag
cgtggtggtcatgagtcatctaaattatttgctgcatttaagaatgcacaagatactaaa
ggtaagccaactgtaattttagctaaaacggttaaaggttacggcatgggtgaagcggcc
gaaggtaaaaacattgctcacggtgtaaagaagatggacatgacgcacgtgcttcagttg
cgtaaccgtctaggtcttgatgacctactgaccgatgagaaagtctctgagctgccttat
cttaagttagaggaaggatctgaagagtataactacttgcatgctcgtcgtaatgggctt
catggttatacaccacagcgtctacctaactttactcaggcactagatcttccaagtgta
gaagagttcggtcctttgcttactgagcaaaagcgtgaaatctcaaccacaatggcattt
gttcgtacattgaacattctgcttaaaaacaaaggaattggtaagaatatcgttccaatc
attgccgacgaagcacgtactttcggcatggaaggtctattccgtcaaattggtatttat
aacccttatggccaggaatacacacctgaagatcgtagtgtcgtttcttactataaagaa
gccacttctggtcaagtattgcaggaaggtatcaacgaactaggtgctatgtcttcatgg
gttgctgcggcaacatcatacagcactaacgatctgccaatgatcccattctacatctac
tactctatgtttggtttccaacgtgttggcgacatggcatggatggcgggtgatcagcaa
gcacgtggcttccttttaggtgctacagcgggccgtacaacactgaacggtgaaggtcta
cagcatgaagatggtcacagccatgttcaggcgaacacgatccctaactgtatctcttat
gatcctacatatgcttacgagctggccgtcattatgcaagatggtattcgtcgcatgtac
ggtgagaaccaagagaacgtgttctactacttaacgctgatgaatgaaaactacgcgatg
ccagcgatgcctgaaggcgctgaagagggcattcgcaaaggtatctataagcttgagtct
tacaaaggtagtaacaaggttcagttaatgagctctggtactatcatgaatgaagtgcgt
aaagcggctcaaatcttgagcgaagagtatgatgttgcgtctgatgtatattctgtaact
tctttcaacgagttaactcgtgaaggccaagatgttgagcgtttcaacatgcttcatcca
gaagctgagcagaaacaagcgtacatcactcaagtaatgggaactgagcctgccattgct
gcaacggattacatgaaaaactatgctgaacaagttcgtgcatttatgccttcagagaca
tttaaagtgttaggtaccgatggtttcggtcgttctgacagccgtgaaaacctacgtcgt
cactttgaagtgaatgcaggttacgttgttgttgctgcactgaatgaacttgctaaacgt
ggcgatattgaaaagtctgtggttgcaaaagccattgctaagttcaacatcgacgctgat
aagacaaacccgctatacgcgtaa
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