Shewanella woodyi: Swoo_0622
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Entry
Swoo_0622 CDS
T00676
Name
(GenBank) O-succinylhomoserine (thiol)-lyase
KO
K01739
cystathionine gamma-synthase [EC:
2.5.1.48
]
Organism
swd
Shewanella woodyi
Pathway
swd00270
Cysteine and methionine metabolism
swd00450
Selenocompound metabolism
swd00920
Sulfur metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd01230
Biosynthesis of amino acids
Module
swd_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Swoo_0622
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Swoo_0622
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Swoo_0622
Enzymes [BR:
swd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.48 cystathionine gamma-synthase
Swoo_0622
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Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
GDC-P
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
ACA84918
UniProt:
B1KDB7
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All DBs
Position
867319..868485
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AA seq
388 aa
AA seq
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MTERKLATIAVRQGIESDTQHGAVVPPIYLSTNYSFDGHKNPRDFDYSRSGNPTRSILGD
AIAGLEKGATGVVTCTGMAAITLVTSLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLA
VVDQTDSQALSEAIALKPKMVWLETPSNPLLRVVDIEAIAQASHEVEALVVVDNTFLSPI
LQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDPELGELLHWWSNTLGLTGSAFDSYL
ALRGLRTLPIRIKEHQANAERVLEVLTNSSAVDKVYYPGLKDHPGHEIAAKQQKGFGAML
SFELKGGEAELVAFLAQLSVFSVAESLGGVESLVAVPATMTHRAMEPEARAEAGVKETLI
RLSVGIEDADDLVADIQAGLTAASAASC
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgtaagttagccacgattgccgtgcgtcaggggattgagtccgatacccaa
catggtgccgtagtaccgccgatctatctttccactaattactccttcgatgggcataaa
aacccaagagattttgattacagtcgctcaggtaatccaactcgctcaattcttggcgat
gccattgcaggccttgagaaaggagccactggcgtcgtaacctgtacgggaatggcagcc
atcactttggtcactagcttgttaggtccagacgatctgcttgtagtacctcacgattgt
tatggtggtagctacagattattcactaatttggctaaaaagggtcaatttaagctggcg
gtggttgatcaaactgacagtcaggctttaagtgaggcgatagcactaaaacctaagatg
gtttggcttgagacgccatcgaatccactgttaagggtggttgatatcgaggcgattgcg
caagcaagtcacgaggttgaagcacttgtggtcgtcgataacactttcctctctcccatt
ttacagcagccacttcttctaggggctgatatcgtgatccactcaacgactaaatatatt
aatggccatagtgatgttgtaggtggcgctgtagtggcgaaagatccagaacttggtgag
ttgctgcattggtggtcaaacaccttagggctgacaggttcggcgtttgacagctatctg
gctctacgtggtcttcgaaccttgcctatccgtattaaagagcatcaagctaatgctgag
cgagtgctagaggtgctgacaaacagtagcgccgtcgacaaggtgtattatcctgggctt
aaagatcatcccggtcacgagattgccgctaagcagcaaaaaggctttggcgctatgctc
agtttcgagttaaaaggcggagaggccgagttagttgcctttttagcgcaactttctgtg
ttttctgtcgcagaaagtttaggtggggtagagagtttagtcgcggttcctgcgacaatg
acccatagagcgatggagccagaggcacgagccgaggcaggggttaaagagacccttatt
cgcctctctgtcggtattgaagatgctgatgatttagttgcagatattcaagctgggctt
actgctgcatctgcagccagctgttaa
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