Shewanella woodyi: Swoo_1390
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Entry
Swoo_1390 CDS
T00676
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
swd
Shewanella woodyi
Pathway
swd00362
Benzoate degradation
swd00621
Dioxin degradation
swd00622
Xylene degradation
swd00984
Steroid degradation
swd01100
Metabolic pathways
swd01120
Microbial metabolism in diverse environments
swd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Swoo_1390
00622 Xylene degradation
Swoo_1390
00621 Dioxin degradation
Swoo_1390
00984 Steroid degradation
Swoo_1390
Enzymes [BR:
swd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
Swoo_1390
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
Swoo_1390
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
Motif
Other DBs
NCBI-ProteinID:
ACA85682
UniProt:
B1KJK9
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All DBs
Position
complement(1745975..1746994)
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AA seq
339 aa
AA seq
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MNISNKKIILHDMCLRDGMHAKRHQISLAEMTQLATALDDAGVPLIEVTHGDGLGGNSVN
YGFAAHSDEEYLSTVIPLMKQAKISALLLPGIGTVDHLRMAHELGVSTIRVAAQCTEADV
TEQHISLSRQLGLDTVGFLMMAHMLEPKALLEQAKLMESYGANCIYCTDSAGYMLQDDVF
ERISVLRDGLKPDTQIGFHGHHNLALGVANSLTAVEAGAERIDGSAAGLGAGAGNTPLEV
FNAVATRMGASTDVDVFKLMAAAEEIVVPMMDQAIRVDRDSLVLGYAGVYSSFLLHAKRA
AEKYGVPSEAILLKLGQMKTVGGQEDMIEDVAINLAKSR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcagtaataaaaaaatcatccttcacgatatgtgtttacgggatggtatgcat
gcaaagcgtcatcaaataagtttggctgagatgactcaactggccacagcccttgatgat
gcaggagtgccgctcatagaggtcacccacggcgatggtttgggcggtaactcagtgaat
tatggatttgccgcccacagcgatgaagagtatctctccaccgtgatccctttaatgaaa
caggccaagatatcagccctgctgctgccaggaattggcactgtcgatcaccttcgaatg
gctcacgagttaggcgtcagcacgatacgtgttgcagcacaatgcacagaagcggatgtg
actgagcaacatatttcactctcacgtcaactgggtttagacacggtgggctttttgatg
atggcccatatgcttgaaccaaaagccctgctagagcaagccaagttgatggaaagttac
ggtgcaaactgtatctactgtaccgattcagctggatatatgctgcaagatgatgtgttt
gagcgtatcagtgtactgcgtgatggcttaaagcctgacactcaaattggctttcacggt
caccacaacttagcactgggtgtggctaactcactcaccgcagtcgaagcaggtgctgaa
cgtatcgatggttcggcagcggggctcggtgcaggagcaggcaacacgcctcttgaagta
tttaacgctgtcgctactcgcatgggcgcaagcaccgatgtcgatgtgtttaaattgatg
gcggcggctgaggagatagtggtccccatgatggatcaagcgatccgagtcgaccgcgac
tccttagtactaggctatgcaggagtttactcctccttcttgcttcacgccaaaagggct
gcagaaaaatatggtgttcccagtgaagctattttactaaaactggggcagatgaaaacc
gttggtggtcaggaagatatgattgaagatgtggccattaatctagccaagagccgctag
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