Shewanella woodyi: Swoo_2439
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Entry
Swoo_2439 CDS
T00676
Name
(GenBank) transcriptional regulator, TraR/DksA family
KO
K06204
RNA polymerase-binding transcription factor
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swd03000
]
Swoo_2439
03021 Transcription machinery [BR:
swd03021
]
Swoo_2439
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_2439
Transcription factors [BR:
swd03000
]
Prokaryotic type
Other transcription factors
Others
Swoo_2439
Transcription machinery [BR:
swd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
Swoo_2439
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA transcription factors
Swoo_2439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-dskA_traR
COG5_N
DUF6730
DUF1542
BLOC1_2
DUF3944
Vir_act_alpha_C
Motif
Other DBs
NCBI-ProteinID:
ACA86717
UniProt:
B1KG10
LinkDB
All DBs
Position
2987951..2988298
Genome browser
AA seq
115 aa
AA seq
DB search
MAINTSAELSDEQLAFLQKLLNDELRKVNGNIDQLEAQTEATSKCSHLDAVDLASQIAAQ
RAAHSVLESQRQQLSEIERAMARLKVGTYGLCEQTGEPIGFERLAVLPWARHTVT
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaacactagcgcagagctttcggatgaacagttagcctttcttcaaaagctc
ctcaacgatgaacttaggaaggtcaatggtaatattgatcagctagaggcgcagacagag
gcaacgtctaaatgctcccacttagacgcagtcgacttggcaagccagatagcagctcaa
agggcggcacattcggtgttagagtcgcagcggcaacagctgagtgagattgaacgtgca
atggctcggttaaaggtggggacttatggcttatgtgagcaaacaggcgagcccatcggg
ttcgagcggttagcagttctaccttgggctagacatacagtgacttaa
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integrated database retrieval system
