Shewanella woodyi: Swoo_3468
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Entry
Swoo_3468 CDS
T00676
Name
(GenBank) conserved hypothetical protein
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_3468
Enzymes [BR:
swd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
Swoo_3468
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swoo_3468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ACA87734
UniProt:
B1KQX8
LinkDB
All DBs
Position
complement(4244002..4245078)
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AA seq
358 aa
AA seq
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MINLFLYCRSGYEKECAAEIQHRAAELEIGGFVKTNKKDGYVIFQCFQAGDANILAQKIK
LDSLIFARQMFAAKELLKNLPEHDRITPIMEALSDVRNAGELRVETPDTNEAKERTAFCR
KFTVPLRQKLKNAGNLLKKENSSRPIIHVCFVASGTAYVGFSFSNNSSPYPMGIPRLKMA
SDAPSRSTLKLDEAFIHFIPEEEQEQRLSSGMNAVDLGACPGGWTYQLVRRGMFVAAVDN
GPMDEGLMETGQVKHYQADGFRFEPPRKNIYWLVCDMIEKPSRVAELIEAWAINGWFKEA
MFNLKLPMKSRYQDVSTILETMATVLEENEIKNFSIKCKHLYHDRDEVTVYLSLNPTQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacctatttttatattgccgctctggttatgaaaaagagtgtgcagctgagata
caacatcgtgcagctgaactcgaaattggtggttttgttaaaaccaacaaaaaagacggc
tatgtgattttccagtgttttcaagccggtgatgcaaatatcttggcacaaaaaattaaa
ttggattcactgatttttgccagacagatgtttgccgctaaagagctgctgaaaaatcta
cctgaacatgatcggatcacaccgattatggaagcgttatccgatgtcaggaatgcgggt
gagttaagggttgaaacacccgataccaatgaagctaaagagcgcacggctttttgtcgt
aaatttacggttcctttaagacagaagctaaaaaacgctggcaacttacttaaaaaagag
aatagcagtcgacctattatacatgtctgttttgtggcatcgggcacggcttacgtgggc
ttctcttttagtaacaatagctctccctatccgatggggatccctaggctaaaaatggcc
agcgatgcaccgagtcgttcgacgcttaaactcgatgaagcctttatccactttattccc
gaagaggagcaggagcagagattaagcagtggcatgaatgccgtcgacttaggtgcttgt
ccaggtggctggacgtatcagttagtgcgtcgcggtatgtttgtggccgctgtggacaat
ggacctatggatgaaggtttgatggagactgggcaggtaaaacactatcaagccgatggt
tttcgttttgagccgccacgtaaaaatatctactggttagtgtgtgacatgattgagaag
ccatctcgtgtggcagagctgattgaagcttgggcgatcaatggctggtttaaagaggcg
atgtttaacctcaagctgccgatgaagagtcgctatcaagatgtctcgacgatattagag
accatggcgactgtacttgaggagaacgagattaagaacttctctatcaagtgtaagcac
ctctaccatgatcgtgatgaagtgactgtgtatttgagtcttaacccgactcaatag
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